STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpoE2DNA-directed RNA polymerase, subunit E'' (rpoE2); Stimulates transcription elongation; Belongs to the archaeal Spt4 family. (66 aa)    
Predicted Functional Partners:
nusG
Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
   
 
 0.997
rpoE1
DNA-directed RNA polymerase, subunit E' (rpoE1); Transcription, RNA polymerase and transcription factors.
  
 
 0.996
rps27AE
SSU ribosomal protein S27AE (rps27AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS31 family.
  
    0.882
SSO0416
Conserved hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).
  
    0.872
rps6E
SSU ribosomal protein S6E (rps6E); Hit to one end of protein, other domains not recognized; Translation, Ribosomal Proteins.
  
    0.869
eif2G
Translation initiation factor eiF 2 gamma (eif2G); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA.
  
    0.864
SSO0414
Conserved hypothetical protein.
       0.852
rpoP
DNA-directed RNA polymerase, subunit P (rpoP); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family.
   
  
 0.754
rpoA1
DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.753
cbiX
Conserved hypothetical protein; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Belongs to the CbiX family. CbiXS subfamily.
       0.602
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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