node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0512 | STK_04410 | STK_05120 | STK_04410 | Hypothetical protein. | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | 0.900 |
ST0512 | csl4 | STK_05120 | STK_22620 | Hypothetical protein. | Exosome RNA-binding subunit Csl4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.985 |
ST0512 | dnaG | STK_05120 | STK_20750 | Hypothetical protein. | Exosome subunit DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.571 |
ST0512 | nep1 | STK_05120 | STK_21290 | Hypothetical protein. | rRNA (pseudouridine-N1-)-methyltransferase Nep1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.999 |
ST0512 | nop5 | STK_05120 | STK_12650 | Hypothetical protein. | Box C/D sRNP component Nop5; Protein synonym:Nop56/58 homolog. | 0.999 |
ST0512 | rps6e | STK_05120 | STK_03820 | Hypothetical protein. | 30S ribosomal protein S6e; N-term changed (+216); Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
ST0512 | rrp4 | STK_05120 | STK_04440 | Hypothetical protein. | Exosome RNA-binding subunit Rrp4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.970 |
ST0512 | rrp41 | STK_05120 | STK_04430 | Hypothetical protein. | Exosome core subunit Rrp41; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.955 |
ST0512 | rrp42 | STK_05120 | STK_04420 | Hypothetical protein. | Exosome core subunit Rrp42; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.962 |
ST0512 | rtcA | STK_05120 | STK_05700 | Hypothetical protein. | Probable RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.995 |
STK_04410 | ST0512 | STK_04410 | STK_05120 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | Hypothetical protein. | 0.900 |
STK_04410 | csl4 | STK_04410 | STK_22620 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | Exosome RNA-binding subunit Csl4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.741 |
STK_04410 | nep1 | STK_04410 | STK_21290 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | rRNA (pseudouridine-N1-)-methyltransferase Nep1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.667 |
STK_04410 | nop5 | STK_04410 | STK_12650 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | Box C/D sRNP component Nop5; Protein synonym:Nop56/58 homolog. | 0.900 |
STK_04410 | rrp4 | STK_04410 | STK_04440 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | Exosome RNA-binding subunit Rrp4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.963 |
STK_04410 | rrp41 | STK_04410 | STK_04430 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | Exosome core subunit Rrp41; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.921 |
STK_04410 | rrp42 | STK_04410 | STK_04420 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | Exosome core subunit Rrp42; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.902 |
STK_04410 | rtcA | STK_04410 | STK_05700 | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | Probable RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.713 |
csl4 | ST0512 | STK_22620 | STK_05120 | Exosome RNA-binding subunit Csl4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Hypothetical protein. | 0.985 |
csl4 | STK_04410 | STK_22620 | STK_04410 | Exosome RNA-binding subunit Csl4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | Hypothetical protein; Probably involved in the biogenesis of the ribosome. | 0.741 |