Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0817 | ST0893 | STK_08170 | STK_08930 | Putative glycosidase. | Putative glucan phosphorylase; N-term changed (-42). | 0.966 |
ST0817 | glgA | STK_08170 | STK_08180 | Putative glycosidase. | Glycogen synthase; N-term changed (-9). | 0.919 |
ST0817 | treX | STK_08170 | STK_09280 | Putative glycosidase. | Glycogen debranching enzyme TreX. | 0.910 |
ST0817 | treY | STK_08170 | STK_09290 | Putative glycosidase. | Maltooligosyltrehalose synthase. | 0.911 |
ST0893 | ST0817 | STK_08930 | STK_08170 | Putative glucan phosphorylase; N-term changed (-42). | Putative glycosidase. | 0.966 |
ST0893 | ST0926 | STK_08930 | STK_09260 | Putative glucan phosphorylase; N-term changed (-42). | Maltooligosyltrehalose trehalohydrolase; Fragment. | 0.919 |
ST0893 | ST0927 | STK_08930 | STK_09270 | Putative glucan phosphorylase; N-term changed (-42). | Maltooligosyltrehalose trehalohydrolase; Fragment. | 0.907 |
ST0893 | argF | STK_08930 | STK_12450 | Putative glucan phosphorylase; N-term changed (-42). | Putative ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.964 |
ST0893 | gap | STK_08930 | STK_13560 | Putative glucan phosphorylase; N-term changed (-42). | Glyceraldehyde-3-phosphate dehydrogenase. | 0.827 |
ST0893 | glgA | STK_08930 | STK_08180 | Putative glucan phosphorylase; N-term changed (-42). | Glycogen synthase; N-term changed (-9). | 0.997 |
ST0893 | treX | STK_08930 | STK_09280 | Putative glucan phosphorylase; N-term changed (-42). | Glycogen debranching enzyme TreX. | 0.992 |
ST0893 | treY | STK_08930 | STK_09290 | Putative glucan phosphorylase; N-term changed (-42). | Maltooligosyltrehalose synthase. | 0.716 |
ST0924 | ST0925 | STK_09240 | STK_09250 | Hypothetical protein. | Hypothetical protein. | 0.773 |
ST0924 | ST0926 | STK_09240 | STK_09260 | Hypothetical protein. | Maltooligosyltrehalose trehalohydrolase; Fragment. | 0.773 |
ST0924 | ST0927 | STK_09240 | STK_09270 | Hypothetical protein. | Maltooligosyltrehalose trehalohydrolase; Fragment. | 0.773 |
ST0924 | treX | STK_09240 | STK_09280 | Hypothetical protein. | Glycogen debranching enzyme TreX. | 0.655 |
ST0924 | treY | STK_09240 | STK_09290 | Hypothetical protein. | Maltooligosyltrehalose synthase. | 0.655 |
ST0925 | ST0924 | STK_09250 | STK_09240 | Hypothetical protein. | Hypothetical protein. | 0.773 |
ST0925 | ST0926 | STK_09250 | STK_09260 | Hypothetical protein. | Maltooligosyltrehalose trehalohydrolase; Fragment. | 0.802 |
ST0925 | ST0927 | STK_09250 | STK_09270 | Hypothetical protein. | Maltooligosyltrehalose trehalohydrolase; Fragment. | 0.802 |
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