Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ST0804Hypothetical protein. (289 aa)    
Predicted Functional Partners:
ST0803
Pyrimidine-specific ribonucleoside hydrolase.
  
    0.798
STK_08044
Hypothetical protein.
       0.693
ST0529
Hypothetical protein.
 
  
 0.682
STK_08047
Hypothetical protein.
       0.665
etfB
Electron transfer flavoprotein beta subunit; N-terminus of this ORF was identified by Edman sequencing.
  
 
 0.629
etfBA
Electron transfer flavoprotein.
  
 
 0.604
etfA
Electron transfer flavoprotein alpha subunit; N-term changed (-3).
  
 
 0.604
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.572
ST2316
Hypothetical protein.
 
  
 0.552
ST0695
Putative APC family transporter.
  
     0.550
Your Current Organism:
Sulfurisphaera tokodaii
NCBI taxonomy Id: 273063
Other names: S. tokodaii str. 7, Sulfolobus sp. (strain 7), Sulfolobus sp. 7, Sulfolobus tokodaii str. 7, Sulfurisphaera tokodaii str. 7, Sulfurisphaera tokodaii strain 7
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