Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0978 | ST0979 | STK_09780 | STK_09790 | Putative phosphomevalonate kinase. | Hypothetical protein; N-term changed (-105). | 0.613 |
ST0978 | STK_09794 | STK_09780 | STK_09794 | Putative phosphomevalonate kinase. | Putative DNA-binding protein. | 0.516 |
ST0978 | mvaD | STK_09780 | STK_09770 | Putative phosphomevalonate kinase. | Diphosphomevalonate decarboxylase; N-term changed (+207); protein synonym:mevalonate pyrophosphate decarboxylase. | 0.997 |
ST0979 | ST0978 | STK_09790 | STK_09780 | Hypothetical protein; N-term changed (-105). | Putative phosphomevalonate kinase. | 0.613 |
ST0979 | STK_09794 | STK_09790 | STK_09794 | Hypothetical protein; N-term changed (-105). | Putative DNA-binding protein. | 0.687 |
ST0979 | STK_09797 | STK_09790 | STK_09797 | Hypothetical protein; N-term changed (-105). | Hypothetical protein. | 0.442 |
ST0979 | mvaD | STK_09790 | STK_09770 | Hypothetical protein; N-term changed (-105). | Diphosphomevalonate decarboxylase; N-term changed (+207); protein synonym:mevalonate pyrophosphate decarboxylase. | 0.604 |
STK_09794 | ST0978 | STK_09794 | STK_09780 | Putative DNA-binding protein. | Putative phosphomevalonate kinase. | 0.516 |
STK_09794 | ST0979 | STK_09794 | STK_09790 | Putative DNA-binding protein. | Hypothetical protein; N-term changed (-105). | 0.687 |
STK_09794 | STK_09797 | STK_09794 | STK_09797 | Putative DNA-binding protein. | Hypothetical protein. | 0.510 |
STK_09794 | mvaD | STK_09794 | STK_09770 | Putative DNA-binding protein. | Diphosphomevalonate decarboxylase; N-term changed (+207); protein synonym:mevalonate pyrophosphate decarboxylase. | 0.516 |
STK_09797 | ST0979 | STK_09797 | STK_09790 | Hypothetical protein. | Hypothetical protein; N-term changed (-105). | 0.442 |
STK_09797 | STK_09794 | STK_09797 | STK_09794 | Hypothetical protein. | Putative DNA-binding protein. | 0.510 |
mvaD | ST0978 | STK_09770 | STK_09780 | Diphosphomevalonate decarboxylase; N-term changed (+207); protein synonym:mevalonate pyrophosphate decarboxylase. | Putative phosphomevalonate kinase. | 0.997 |
mvaD | ST0979 | STK_09770 | STK_09790 | Diphosphomevalonate decarboxylase; N-term changed (+207); protein synonym:mevalonate pyrophosphate decarboxylase. | Hypothetical protein; N-term changed (-105). | 0.604 |
mvaD | STK_09794 | STK_09770 | STK_09794 | Diphosphomevalonate decarboxylase; N-term changed (+207); protein synonym:mevalonate pyrophosphate decarboxylase. | Putative DNA-binding protein. | 0.516 |