Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST1113 | ST1114 | STK_11130 | STK_11140 | Putative peptidase M20 family protein. | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.419 |
ST1113 | argC/lysY | STK_11130 | STK_01950 | Putative peptidase M20 family protein. | N-acetyl-gamma-glutamyl-phosphate/N-acetyl- gamma-aminoadipyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.590 |
ST1113 | argG | STK_11130 | STK_15010 | Putative peptidase M20 family protein. | Argininosuccinate synthase; Protein synonym:citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.560 |
ST1113 | moaD/moaE | STK_11130 | STK_05270 | Putative peptidase M20 family protein. | Molybdopterin converting factor; Protein synonym:molybdopterin synthase MoaE/MoaD. | 0.503 |
ST1114 | ST1113 | STK_11140 | STK_11130 | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative peptidase M20 family protein. | 0.419 |
argC/lysY | ST1113 | STK_01950 | STK_11130 | N-acetyl-gamma-glutamyl-phosphate/N-acetyl- gamma-aminoadipyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | Putative peptidase M20 family protein. | 0.590 |
argC/lysY | argG | STK_01950 | STK_15010 | N-acetyl-gamma-glutamyl-phosphate/N-acetyl- gamma-aminoadipyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | Argininosuccinate synthase; Protein synonym:citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.998 |
argC/lysY | moaD/moaE | STK_01950 | STK_05270 | N-acetyl-gamma-glutamyl-phosphate/N-acetyl- gamma-aminoadipyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | Molybdopterin converting factor; Protein synonym:molybdopterin synthase MoaE/MoaD. | 0.600 |
argG | ST1113 | STK_15010 | STK_11130 | Argininosuccinate synthase; Protein synonym:citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Putative peptidase M20 family protein. | 0.560 |
argG | argC/lysY | STK_15010 | STK_01950 | Argininosuccinate synthase; Protein synonym:citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | N-acetyl-gamma-glutamyl-phosphate/N-acetyl- gamma-aminoadipyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.998 |
moaD/moaE | ST1113 | STK_05270 | STK_11130 | Molybdopterin converting factor; Protein synonym:molybdopterin synthase MoaE/MoaD. | Putative peptidase M20 family protein. | 0.503 |
moaD/moaE | argC/lysY | STK_05270 | STK_01950 | Molybdopterin converting factor; Protein synonym:molybdopterin synthase MoaE/MoaD. | N-acetyl-gamma-glutamyl-phosphate/N-acetyl- gamma-aminoadipyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.600 |