Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0380 | taw3 | STK_03800 | STK_14890 | PIN domain protein; N-term changed (-15). | Hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family. | 0.645 |
ST0567 | taw1 | STK_05670 | STK_12820 | Methyltransferase. | Hypothetical protein; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe). | 0.510 |
ST0567 | taw3 | STK_05670 | STK_14890 | Methyltransferase. | Hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family. | 0.504 |
ST1273 | taw3 | STK_12730 | STK_14890 | Hypothetical protein. | Hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family. | 0.570 |
ST1484 | ST1485 | STK_14840 | STK_14850 | Hypothetical protein. | Hypothetical protein. | 0.775 |
ST1484 | ST1486 | STK_14840 | STK_14860 | Hypothetical protein. | Putative ArsR family transcriptional regulator. | 0.771 |
ST1484 | ST1488 | STK_14840 | STK_14880 | Hypothetical protein. | Hypothetical protein. | 0.621 |
ST1484 | lpdA-2 | STK_14840 | STK_14870 | Hypothetical protein. | Putative dihydrolipoyl dehydrogenase. | 0.670 |
ST1484 | taw3 | STK_14840 | STK_14890 | Hypothetical protein. | Hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family. | 0.478 |
ST1485 | ST1484 | STK_14850 | STK_14840 | Hypothetical protein. | Hypothetical protein. | 0.775 |
ST1485 | ST1486 | STK_14850 | STK_14860 | Hypothetical protein. | Putative ArsR family transcriptional regulator. | 0.736 |
ST1485 | ST1488 | STK_14850 | STK_14880 | Hypothetical protein. | Hypothetical protein. | 0.670 |
ST1485 | lpdA-2 | STK_14850 | STK_14870 | Hypothetical protein. | Putative dihydrolipoyl dehydrogenase. | 0.658 |
ST1485 | taw3 | STK_14850 | STK_14890 | Hypothetical protein. | Hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family. | 0.508 |
ST1486 | ST1484 | STK_14860 | STK_14840 | Putative ArsR family transcriptional regulator. | Hypothetical protein. | 0.771 |
ST1486 | ST1485 | STK_14860 | STK_14850 | Putative ArsR family transcriptional regulator. | Hypothetical protein. | 0.736 |
ST1486 | ST1488 | STK_14860 | STK_14880 | Putative ArsR family transcriptional regulator. | Hypothetical protein. | 0.727 |
ST1486 | lpdA-2 | STK_14860 | STK_14870 | Putative ArsR family transcriptional regulator. | Putative dihydrolipoyl dehydrogenase. | 0.745 |
ST1486 | taw3 | STK_14860 | STK_14890 | Putative ArsR family transcriptional regulator. | Hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family. | 0.552 |
ST1488 | ST1484 | STK_14880 | STK_14840 | Hypothetical protein. | Hypothetical protein. | 0.621 |
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