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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbsAProtein synonym:cytochrome bc1-analogous complex subunit. (466 aa)    
Predicted Functional Partners:
cbsB
Cytochrome bc1-analogous complex subunit CbsB.
     
 0.958
soxN
Cytochrome b; Protein synonym:cytochrome bc1-analogous complex subunit.
     
 0.840
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
      
 0.743
foxA
Putative cytochrome c oxidase subunit I; N-term changed (-33).
      
 0.737
soxL
Protein synonym:cytochrome bc1-analogous complex subunit.
     
 0.679
ST1663
Hypothetical protein.
       0.522
ST1661
Hypothetical protein.
       0.499
ST1662
Hypothetical protein.
       0.499
soxE
Sulfocyanin; Protein synonym:blue copper protein; protein synonym:second terminal oxidase complex subunit.
      
 0.450
copT
Putative copper-binding protein CopT.
      
 0.450
Your Current Organism:
Sulfurisphaera tokodaii
NCBI taxonomy Id: 273063
Other names: S. tokodaii str. 7, Sulfolobus sp. (strain 7), Sulfolobus sp. 7, Sulfolobus tokodaii str. 7, Sulfurisphaera tokodaii str. 7, Sulfurisphaera tokodaii strain 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.