STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmr4Putative CRISPR-associated protein Cmr4. (284 aa)    
Predicted Functional Partners:
cmr5
Putative CRISPR-associated protein Cmr5.
   
 
 0.997
cmr6
Putative CRISPR-associated protein Cmr6; N-term changed (-24).
 
 
 
 0.997
cmr2
Putative CRISPR-associated protein Cmr2.
 
 
 
 0.991
cmr3
Putative CRISPR-associated protein Cmr3; N-term changed (+42).
   
 
 0.989
cmr1
Putative CRISPR-associated protein Cmr1.
   
 
 0.979
ST0012
Hypothetical protein.
   
 
 0.889
cas6
Putative CRISPR-associated protein Cas6.
     
 0.739
cas6-2
Putative CRISPR-associated protein Cas6; N-term changed (+48).
     
 0.739
cas6-3
Putative CRISPR-associated protein Cas6; N-term changed (-48).
     
 0.739
cas5
Putative CRISPR-associated protein Cas5.
     
 0.719
Your Current Organism:
Sulfurisphaera tokodaii
NCBI taxonomy Id: 273063
Other names: S. tokodaii str. 7, Sulfolobus sp. (strain 7), Sulfolobus sp. 7, Sulfolobus tokodaii str. 7, Sulfurisphaera tokodaii str. 7, Sulfurisphaera tokodaii strain 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.