Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0759 | ST0859 | STK_07590 | STK_08590 | SSS family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Putative APC family transporter. | 0.427 |
ST0759 | ST2167 | STK_07590 | STK_21670 | SSS family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Putative peptidase S53 family protein. | 0.404 |
ST0859 | ST0759 | STK_08590 | STK_07590 | Putative APC family transporter. | SSS family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.427 |
ST0859 | ST1583 | STK_08590 | STK_15830 | Putative APC family transporter. | Putative ABC transporter permease protein. | 0.542 |
ST0859 | ST2167 | STK_08590 | STK_21670 | Putative APC family transporter. | Putative peptidase S53 family protein. | 0.433 |
ST0859 | ST2365 | STK_08590 | STK_23650 | Putative APC family transporter. | Hypothetical protein. | 0.611 |
ST0859 | ST2551 | STK_08590 | STK_25510 | Putative APC family transporter. | Putative APC family transporter. | 0.618 |
ST0859 | ST2610 | STK_08590 | STK_26100 | Putative APC family transporter. | MFS transporter. | 0.590 |
ST0859 | amyA | STK_08590 | STK_11020 | Putative APC family transporter. | Alpha-amylase; N-term changed (+12). | 0.572 |
ST1583 | ST0859 | STK_15830 | STK_08590 | Putative ABC transporter permease protein. | Putative APC family transporter. | 0.542 |
ST1583 | ST2167 | STK_15830 | STK_21670 | Putative ABC transporter permease protein. | Putative peptidase S53 family protein. | 0.423 |
ST1583 | ST2365 | STK_15830 | STK_23650 | Putative ABC transporter permease protein. | Hypothetical protein. | 0.592 |
ST1583 | ST2551 | STK_15830 | STK_25510 | Putative ABC transporter permease protein. | Putative APC family transporter. | 0.438 |
ST1583 | ST2610 | STK_15830 | STK_26100 | Putative ABC transporter permease protein. | MFS transporter. | 0.571 |
ST1583 | amyA | STK_15830 | STK_11020 | Putative ABC transporter permease protein. | Alpha-amylase; N-term changed (+12). | 0.722 |
ST2167 | ST0759 | STK_21670 | STK_07590 | Putative peptidase S53 family protein. | SSS family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.404 |
ST2167 | ST0859 | STK_21670 | STK_08590 | Putative peptidase S53 family protein. | Putative APC family transporter. | 0.433 |
ST2167 | ST1583 | STK_21670 | STK_15830 | Putative peptidase S53 family protein. | Putative ABC transporter permease protein. | 0.423 |
ST2167 | ST2365 | STK_21670 | STK_23650 | Putative peptidase S53 family protein. | Hypothetical protein. | 0.481 |
ST2167 | ST2443 | STK_21670 | STK_24430 | Putative peptidase S53 family protein. | Probable nickel transporter; N-term changed (-105); Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.426 |
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