Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST1655 | ST1875 | STK_16550 | STK_18750 | Hypothetical protein. | Hypothetical protein. | 0.529 |
ST1655 | ST2369 | STK_16550 | STK_23690 | Hypothetical protein. | Hypothetical protein. | 0.905 |
ST1875 | ST1655 | STK_18750 | STK_16550 | Hypothetical protein. | Hypothetical protein. | 0.529 |
ST1875 | ST2369 | STK_18750 | STK_23690 | Hypothetical protein. | Hypothetical protein. | 0.486 |
ST2368 | ST2369 | STK_23680 | STK_23690 | Hypothetical protein; N-terminus of this ORF was identified by Edman sequencing. | Hypothetical protein. | 0.943 |
ST2368 | ST2370 | STK_23680 | STK_23700 | Hypothetical protein; N-terminus of this ORF was identified by Edman sequencing. | Sulerythrin; N-terminus of this ORF was identified by Edman sequencing; protein synonym:rubrerythrin-like protein. | 0.962 |
ST2368 | ST2371 | STK_23680 | STK_23710 | Hypothetical protein; N-terminus of this ORF was identified by Edman sequencing. | Hypothetical protein. | 0.509 |
ST2368 | ST2372 | STK_23680 | STK_23720 | Hypothetical protein; N-terminus of this ORF was identified by Edman sequencing. | Hypothetical protein. | 0.493 |
ST2369 | ST1655 | STK_23690 | STK_16550 | Hypothetical protein. | Hypothetical protein. | 0.905 |
ST2369 | ST1875 | STK_23690 | STK_18750 | Hypothetical protein. | Hypothetical protein. | 0.486 |
ST2369 | ST2368 | STK_23690 | STK_23680 | Hypothetical protein. | Hypothetical protein; N-terminus of this ORF was identified by Edman sequencing. | 0.943 |
ST2369 | ST2370 | STK_23690 | STK_23700 | Hypothetical protein. | Sulerythrin; N-terminus of this ORF was identified by Edman sequencing; protein synonym:rubrerythrin-like protein. | 0.952 |
ST2369 | ST2371 | STK_23690 | STK_23710 | Hypothetical protein. | Hypothetical protein. | 0.516 |
ST2369 | ST2372 | STK_23690 | STK_23720 | Hypothetical protein. | Hypothetical protein. | 0.493 |
ST2369 | dld | STK_23690 | STK_06490 | Hypothetical protein. | D-lactate dehydrogenase. | 0.934 |
ST2369 | egsA | STK_23690 | STK_03440 | Hypothetical protein. | Sn-glycerol-1-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. | 0.900 |
ST2369 | gap | STK_23690 | STK_13560 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.534 |
ST2369 | glcD | STK_23690 | STK_22950 | Hypothetical protein. | Putative glycolate oxidase subunit GlcD. | 0.810 |
ST2370 | ST2368 | STK_23700 | STK_23680 | Sulerythrin; N-terminus of this ORF was identified by Edman sequencing; protein synonym:rubrerythrin-like protein. | Hypothetical protein; N-terminus of this ORF was identified by Edman sequencing. | 0.962 |
ST2370 | ST2369 | STK_23700 | STK_23690 | Sulerythrin; N-terminus of this ORF was identified by Edman sequencing; protein synonym:rubrerythrin-like protein. | Hypothetical protein. | 0.952 |
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