STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DsrEUncharacterized ACR involved in intracellular sulfur reduction; Best Blastp hit = gi|7445026|pir||B72310 conserved hypothetical protein - Thermotoga maritima (strain MSB8) gi|4981520|gb|AAD36060.1|AE001760_10 (AE001760) conserved hypothetical protein [Thermotoga maritima], score 150, E-value 7.00E-36. (117 aa)    
Predicted Functional Partners:
TTE0086
Conserved hypothetical protein; Best Blastp hit = gi|7452094|pir||A72310 hypothetical protein TM0980 - Thermotoga maritima (strain MSB8) gi|4981519|gb|AAD36059.1|AE001760_9 (AE001760) hypothetical protein [Thermotoga maritima], score 116, E-value 1.00E-25.
  
 0.998
DsrH
Uncharacterized ACR involved in oxidation of intracellular sulfur; Best Blastp hit = gi|7462345|pir||H72309 conserved hypothetical protein - Thermotoga maritima (strain MSB8) gi|4981518|gb|AAD36058.1|AE001760_8 (AE001760) conserved hypothetical protein [Thermotoga maritima], score 64.7, E-value 2.00E-10.
  
 
 0.984
SirA
Predicted Transcriptional regulator; Best Blastp hit = gi|2842585|sp|Q58397|Y990_METJA HYPOTHETICAL PROTEIN MJ0990 gi|2128042|pir||F64423 hypothetical protein homolog MJ0990 - Methanococcus jannaschii gi|1591652|gb|AAB98992.1| (U67541) conserved hypothetical protein [Methanococcus jannaschii], score 52, E-value 1.00E-06; Belongs to the sulfur carrier protein TusA family.
 
 
 0.976
SirA2
Predicted Transcriptional regulator; Best Blastp hit = gi|13124657|sp|Q9X078|Y983_THEMA HYPOTHETICAL PROTEIN TM0983 gi|7449744|pir||D72310 conserved hypothetical protein - Thermotoga maritima (strain MSB8) gi|4981522|gb|AAD36062.1|AE001760_12 (AE001760) conserved hypothetical protein [Thermotoga maritima], score 80.9, E-value 2.00E-15; Belongs to the sulfur carrier protein TusA family.
 
  
 0.960
TTE0084
Predicted transporter components; Best Blastp hit = gi|7462169|pir||C72310 conserved hypothetical protein - Thermotoga maritima (strain MSB8) gi|4981521|gb|AAD36061.1|AE001760_11 (AE001760) conserved hypothetical protein [Thermotoga maritima], score 311, E-value 8.00E-84.
 
    0.929
Lpd
Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes; Best Blastp hit = gi|13622179|gb|AAK33923.1| '(AE006548) putative dihydrolipoamide dehydrogenase, component E3 [Streptococcus pyogenes]', score 313, E-value 4.00E-84.
       0.737
GcvH
Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.702
SelA
Selenocysteine synthase (seryl-tRNASer selenium transferase); Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.576
SirA3
Predicted Transcriptional regulator; Best Blastp hit = gi|11346752|pir||E81297 hypothetical protein Cj1505c [imported] - Campylobacter jejuni (strain NCTC 11168) gi|6968930|emb|CAB73926.1| (AL139078) hypothetical protein Cj1505c [Campylobacter jejuni], score 114, E-value 9.00E-25; Belongs to the sulfur carrier protein TusA family.
  
  
 0.557
SelB
Best Blastp hit = gi|5763687|emb|CAB53235.1| (AJ245960) elongation factor SelB [Eubacterium acidaminophilum], score 573, E-value 1.00E-162.
     
 0.545
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.