Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TTE0200Predicted ATPase related to phosphate starvation-inducible protein PhoH; Best Blastp hit = gi|7475749|pir||A69873 phosphate starvation inducible protein homolog ylaK - Bacillus subtilis gi|2224770|emb|CAB09716.1| (Z97025) product similar to E. coli PhoH protein [Bacillus subtilis] gi|2633852|emb|CAB13354.1| (Z99111) similar to phosphate starvation inducible protein [Bacillus subtilis], score 452, E-value 1.00E-126. (414 aa)    
Predicted Functional Partners:
ybeY
Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.837
RecO
Recombinational DNA repair protein; Involved in DNA repair and RecF pathway recombination.
  
  
 0.676
CafA
Best Blastp hit = gi|12720583|gb|AAK02426.1| (AE006070) CafA [Pasteurella multocida], score 276, E-value 5.00E-73.
 
  
 0.474
MglA
ABC-type sugar (aldose) transport system, ATPase component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     
 0.467
RbsK
Sugar kinases, ribokinase family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.460
PurR2
Transcriptional regulator; Best Blastp hit = gi|1168844|sp|P46828|CCPA_BACME GLUCOSE-RESISTANCE AMYLASE REGULATOR (CATABOLITE CONTROL PROTEIN) gi|2126809|pir||I39800 catabolite control protein - Bacillus megaterium gi|415664|gb|AAA22295.1| (L26052) catabolite control protein [Bacillus megaterium], score 256, E-value 2.00E-67.
       0.439
RbsD
Uncharacterized components of ribose/xylose transport systems; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
       0.439
AraH
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Best Blastp hit = gi|10176355|dbj|BAB07450.1| (AP001519) ribose ABC transporter (permease) [Bacillus halodurans], score 229, E-value 4.00E-59; Belongs to the binding-protein-dependent transport system permease family.
       0.439
NadE
NAD synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.402
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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