Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BioF | GcvP | TTE2406 | TTE0293 | 7-keto-8-aminopelargonate synthetase and related enzymes; Best Blastp hit = gi|13541229|ref|NP_110917.1| Glycine C-acetyltransferase [Thermoplasma volcanium], score 249, E-value 5.00E-65. | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.919 |
| BioF | GcvP2 | TTE2406 | TTE0294 | 7-keto-8-aminopelargonate synthetase and related enzymes; Best Blastp hit = gi|13541229|ref|NP_110917.1| Glycine C-acetyltransferase [Thermoplasma volcanium], score 249, E-value 5.00E-65. | Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.918 |
| BioF | GcvT | TTE2406 | TTE0296 | 7-keto-8-aminopelargonate synthetase and related enzymes; Best Blastp hit = gi|13541229|ref|NP_110917.1| Glycine C-acetyltransferase [Thermoplasma volcanium], score 249, E-value 5.00E-65. | Glycine cleavage system T protein (aminomethyltransferase); The glycine cleavage system catalyzes the degradation of glycine. | 0.505 |
| BioF | Gly1 | TTE2406 | TTE0267 | 7-keto-8-aminopelargonate synthetase and related enzymes; Best Blastp hit = gi|13541229|ref|NP_110917.1| Glycine C-acetyltransferase [Thermoplasma volcanium], score 249, E-value 5.00E-65. | Threonine aldolase; Best Blastp hit = gi|7462865|pir||C72215 L-allo-threonine aldolase - Thermotoga maritima (strain MSB8) gi|4982322|gb|AAD36809.1|AE001813_1 (AE001813) L-allo-threonine aldolase [Thermotoga maritima], score 402, E-value 1.00E-111. | 0.916 |
| BioF | GlyA | TTE2406 | TTE2130 | 7-keto-8-aminopelargonate synthetase and related enzymes; Best Blastp hit = gi|13541229|ref|NP_110917.1| Glycine C-acetyltransferase [Thermoplasma volcanium], score 249, E-value 5.00E-65. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.934 |
| GcvH | GcvH2 | TTE0089 | TTE0295 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.901 |
| GcvH | GcvP | TTE0089 | TTE0293 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.998 |
| GcvH | GcvP2 | TTE0089 | TTE0294 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.995 |
| GcvH | GcvT | TTE0089 | TTE0296 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system T protein (aminomethyltransferase); The glycine cleavage system catalyzes the degradation of glycine. | 0.999 |
| GcvH | GlyA | TTE0089 | TTE2130 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.954 |
| GcvH | Lpd | TTE0089 | TTE0088 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes; Best Blastp hit = gi|13622179|gb|AAK33923.1| '(AE006548) putative dihydrolipoamide dehydrogenase, component E3 [Streptococcus pyogenes]', score 313, E-value 4.00E-84. | 0.991 |
| GcvH | Lpd2 | TTE0089 | TTE1674 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes; Best Blastp hit = gi|2147325|pir||I40794 dihydrolipoamide dehydrogenase (EC 1.8.1.4) [validated] - Clostridium magnum gi|472330|gb|AAA21748.1| (L31844) dihydrolipoamide dehydrogenase [Clostridium magnum], score 395, E-value 1.00E-109. | 0.962 |
| GcvH | PurL | TTE0089 | TTE0810 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interac [...] | 0.816 |
| GcvH2 | GcvH | TTE0295 | TTE0089 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.901 |
| GcvH2 | GcvP | TTE0295 | TTE0293 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.999 |
| GcvH2 | GcvP2 | TTE0295 | TTE0294 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
| GcvH2 | GcvT | TTE0295 | TTE0296 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine cleavage system T protein (aminomethyltransferase); The glycine cleavage system catalyzes the degradation of glycine. | 0.999 |
| GcvH2 | GlyA | TTE0295 | TTE2130 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.954 |
| GcvH2 | Lpd | TTE0295 | TTE0088 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes; Best Blastp hit = gi|13622179|gb|AAK33923.1| '(AE006548) putative dihydrolipoamide dehydrogenase, component E3 [Streptococcus pyogenes]', score 313, E-value 4.00E-84. | 0.965 |
| GcvH2 | Lpd2 | TTE0295 | TTE1674 | Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes; Best Blastp hit = gi|2147325|pir||I40794 dihydrolipoamide dehydrogenase (EC 1.8.1.4) [validated] - Clostridium magnum gi|472330|gb|AAA21748.1| (L31844) dihydrolipoamide dehydrogenase [Clostridium magnum], score 395, E-value 1.00E-109. | 0.962 |
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