STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE0455Conserved hypothetical protein; Best Blastp hit = gi|6226549|sp|O33830|AGLA_THEMA ALPHA-GLUCOSIDASE (MALTASE) gi|7462053|pir||F72205 alpha-glucosidase - Thermotoga maritima (strain MSB8) gi|4982417|gb|AAD36897.1|AE001820_6 (AE001820) alpha-glucosidase [Thermotoga maritima], score 84.7, E-value 1.00E-16. (56 aa)    
Predicted Functional Partners:
PtsG
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; Best Blastp hit = gi|10173035|dbj|BAB04141.1| '(AP001508) PTS system, N-acetylglucosamine-specific enzyme II, ABC component [Bacillus halodurans]', score 418, E-value 1.00E-116.
  
  
 0.674
TTE0456
Methenyl tetrahydrofolate cyclohydrolase; Best Blastp hit = gi|13540921|ref|NP_110609.1| Formiminotransferase cyclodeaminase [Thermoplasma volcanium], score 107, E-value 1.00E-22.
       0.571
PspF
NtrC family Transcriptional regulator, ATPase domain protein; Best Blastp hit = gi|126223|sp|P23914|LEVR_BACSU TRANSCRIPTIONAL REGULATORY PROTEIN LEVR gi|98399|pir||A39160 transcription activator of levanase operon levR - Bacillus subtilis gi|143150|gb|AAA22572.1| (M60105) levR [Bacillus subtilis] gi|2108261|emb|CAA63460.1| (X92868) transcriptional regulatory protein [Bacillus subtilis] gi|2635154|emb|CAB14650.1| (Z99117) transcriptional regulator (NifA/NtrC family) [Bacillus subtilis], score 417, E-value 1.00E-115.
     
 0.518
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.