STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE0524Conserved hypothetical protein; Best Blastp hit = gi|6939617|dbj|BAA90649.1| (AB003153) CwlV [Paenibacillus polymyxa], score 70.9, E-value 1.00E-11. (222 aa)    
Predicted Functional Partners:
AmiC2
N-acetylmuramoyl-L-alanine amidase; Best Blastp hit = gi|6969396|gb|AAF33754.1|AF216288_1 (AF216288) putative N-acetylmuramoyl-L-alanine amidase [Nostoc sp. PCC 7120], score 132, E-value 5.00E-30.
 
 
  
 0.896
TTE0167
S-layer homology domain protein; Best Blastp hit = gi|4099045|gb|AAD09354.1| (U82255) s-layer associated multidomain endoglucanase [anaerobic thermophile KM-THCJ], score 81.3, E-value 3.00E-14.
 
   
 0.792
TTE0116
S-layer homology domain protein; Best Blastp hit = gi|1434920|dbj|BAA13073.1| (D86346) crystal protein [Bacillus thuringiensis], score 85.9, E-value 9.00E-16.
 
    0.787
TTE2605
S-layer homology domain protein; Best Blastp hit = gi|12584561|emb|CAC27412.1| '(AJ307315) endo-1,3(4)-beta-glucanase [Clostridium thermocellum]', score 87, E-value 2.00E-16.
 
    0.785
TTE2411
S-layer homology domain protein; Best Blastp hit = gi|7435342|pir||S72635 exo-poly-alpha-galacturonosidase (EC 3.2.1.82) precursor - Thermoanaerobacterium thermosulfurigenes gi|1255234|gb|AAB08040.1| (U50951) polygalacturonase precursor [Thermoanaerobacterium thermosulfurigenes], score 358, E-value 2.00E-97.
  
     0.774
TTE0430
Hypothetical protein.
  
     0.773
WcaK
Conserved hypothetical protein; Best Blastp hit = gi|8247358|emb|CAB92958.1| (AJ401026) putative pyruvyl-transferase [Thermoanaerobacter thermohydrosulfuricus], score 526, E-value 1.00E-148.
 
  
 0.773
TTE0421
Hypothetical protein.
  
     0.769
TTE0166
S-layer homology domain protein; Best Blastp hit = gi|1235795|gb|AAB00841.1| (M57692) pullulanase [Thermoanaerobacterium thermosulfurigenes], score 64.3, E-value 6.00E-09.
  
     0.768
TTE2087
S-layer homology domain protein; Best Blastp hit = gi|12584561|emb|CAC27412.1| '(AJ307315) endo-1,3(4)-beta-glucanase [Clostridium thermocellum]', score 76.6, E-value 6.00E-13.
  
     0.761
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.