STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE0739Hypothetical protein. (91 aa)    
Predicted Functional Partners:
TTE0740
Capsular polysaccharide biosynthesis; Best Blastp hit = gi|10176293|dbj|BAB07388.1| (AP001519) capsular polysaccharide biosynthesis [Bacillus halodurans], score 71.2, E-value 1.00E-11.
  
  
 0.583
TTE0741
Predicted site-specific integrase-resolvase; Best Blastp hit = gi|2495742|sp|Q60329|Y014_METJA HYPOTHETICAL PROTEIN MJ0014 gi|2128081|pir||F64301 hypothetical protein MJ0014 - Methanococcus jannaschii gi|1590824|gb|AAB97992.1| (U67460) conserved hypothetical protein [Methanococcus jannaschii], score 159, E-value 3.00E-38.
       0.458
TTE0742
Hypothetical protein.
       0.458
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.