STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BaeS3Sensory transduction histidine kinases; Best Blastp hit = gi|3687664|gb|AAC62214.1| (AF049873) sensor protein [Lactococcus lactis], score 148, E-value 2.00E-34. (448 aa)    
Predicted Functional Partners:
OmpR4
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; Best Blastp hit = gi|10802733|gb|AAG23588.1|AF244639_1 (AF244639) DNA-binding response regulator [Carboxydothermus hydrogenoformans], score 189, E-value 4.00E-47.
 
 0.983
OmpR2
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; Best Blastp hit = gi|11995653|gb|AAF70312.2|AF260326_1 (AF260326) SrrA [Staphylococcus aureus] gi|13701291|dbj|BAB42585.1| (AP003134) staphylococcal respiratory response protein SrrA [Staphylococcus aureus] gi|13875809|dbj|BAB45414.1| (AP003362) transcriptional regulatory protein ResD homolog [Staphylococcus aureus], score 187, E-value 1.00E-46.
 
 0.970
OmpR5
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; Best Blastp hit = gi|6978029|gb|AAF34247.1|AF168003_2 (AF168003) putative response regulator [Desulfovibrio gigas], score 138, E-value 1.00E-31.
   
 0.944
OmpR6
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; Best Blastp hit = gi|7404414|sp|P13792|PHOP_BACSU ALKALINE PHOSPHATASE SYNTHESIS TRANSCRIPTIONAL REGULATORY PROTEIN PHOP gi|7429064|pir||RGBSAP phosphate response regulator protein phoP - Bacillus subtilis gi|2293270|gb|AAC00348.1| (AF008220) signal transduction regulator [Bacillus subtilis] gi|2635376|emb|CAB14871.1| (Z99118) two-component response regulator [Bacillus subtilis], score 206, E-value 2.00E-52.
 
 0.921
KdpD
Osmosensitive K+ channel His kinase sensor domain protein; Best Blastp hit = gi|11281914|pir||T46849 K+-transporting ATPase (EC 3.6.1.-) chain D' [imported] - Anabaena sp gi|6635817|gb|AAF19990.1|AF213466_5 (AF213466) potassium-dependent ATPase subunit D' [Anabaena sp. L-31], score 312, E-value 4.00E-84.
 
 
 0.913
KdpD2
Osmosensitive K+ channel His kinase sensor domain protein; Best Blastp hit = gi|13472735|ref|NP_104302.1| two-component sensor KdpD [Mesorhizobium loti] gi|14023482|dbj|BAB50088.1| (AP003001) two-component sensor; KdpD [Mesorhizobium loti], score 366, E-value 1.00E-100.
 
 
 0.913
OmpR8
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; Best Blastp hit = gi|4104602|gb|AAD10263.1| (AF036966) putative response regulator [Lactobacillus sakei], score 278, E-value 3.00E-74.
 
 0.913
RbsB
Periplasmic sugar-binding proteins; Best Blastp hit = gi|12720371|gb|AAK02237.1| (AE006050) RbsB [Pasteurella multocida], score 325, E-value 5.00E-88.
 
 
    0.902
OmpR
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; Best Blastp hit = gi|6687469|emb|CAB64972.1| (AJ012050) VicR protein [Enterococcus faecalis], score 216, E-value 2.00E-55.
 
 0.895
OmpR7
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; Best Blastp hit = gi|10176652|dbj|BAB07746.1| (AP001520) two-component response regulator [Bacillus halodurans], score 224, E-value 8.00E-58.
 
 0.889
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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