STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE0936Hypothetical protein. (79 aa)    
Predicted Functional Partners:
TTE0935
Hypothetical protein.
       0.773
IlvE
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
       0.550
TTE0934
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain; Best Blastp hit = gi|7514241|pir||A71213 alanine--tRNA ligase truncated homolog PH1969 - Pyrococcus horikoshii gi|3258413|dbj|BAA31096.1| (AP000007) 404aa long hypothetical alanyl-tRNA synthetase [Pyrococcus horikoshii], score 177, E-value 3.00E-43.
       0.550
TTE0937
Conserved hypothetical protein; Best Blastp hit = gi|7519296|pir||A71195 hypothetical protein PH1832 - Pyrococcus horikoshii gi|3258269|dbj|BAA30952.1| (AP000007) 202aa long hypothetical protein [Pyrococcus horikoshii], score 108, E-value 6.00E-23.
       0.516
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.