STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE1254Conserved hypothetical protein; Best Blastp hit = gi|13621929|gb|AAK33694.1| (AE006527) conserved hypothetical protein [Streptococcus pyogenes], score 59.7, E-value 2.00E-08. (156 aa)    
Predicted Functional Partners:
rnj
Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.799
TTE1564
Conserved hypothetical protein; Best Blastp hit = gi|12723715|gb|AAK04893.1|AE006312_13 (AE006312) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis], score 71.6, E-value 6.00E-12.
  
     0.743
mltG
Predicted periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.664
Fur3
Fe2+/Zn2+ uptake regulation proteins; Best Blastp hit = gi|10174144|dbj|BAB05246.1| (AP001512) ferric uptake regulation protein [Bacillus halodurans], score 117, E-value 8.00E-26; Belongs to the Fur family.
  
    0.595
SmtA3
SAM-dependent methyltransferases; Best Blastp hit = gi|7474470|pir||F69979 caffeoyl-CoA O-methyltransferase homolog yrrM - Bacillus subtilis gi|2635182|emb|CAB14678.1| (Z99117) similar to caffeoyl-CoA O-methyltransferase [Bacillus subtilis], score 134, E-value 1.00E-30.
       0.586
TTE1257
Collagenase and related proteases; Best Blastp hit = gi|10173890|dbj|BAB04993.1| (AP001511) protease [Bacillus halodurans], score 356, E-value 3.00E-97.
       0.585
TTE2425
Conserved hypothetical protein; Best Blastp hit = gi|14089668|emb|CAC13428.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis], score 58.5, E-value 5.00E-08.
  
   
 0.530
CbiQ3
ABC-type cobalt transport system, permease component CbiQ and related transporters; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
    0.508
FtsI2
Best Blastp hit = gi|7442740|pir||F70402 penicillin binding protein 2 - Aquifex aeolicus gi|2983643|gb|AAC07210.1| (AE000728) penicillin binding protein 2 [Aquifex aeolicus], score 194, E-value 2.00E-48.
       0.502
QueA
S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
  
     0.474
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.