Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AcpP | AtpH | TTE1471 | TTE0634 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | F0F1-type ATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.604 |
| AcpP | DnaJ | TTE1471 | TTE0956 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Molecular chaperones (contain C-terminal Zn finger domain); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-de [...] | 0.907 |
| AcpP | NuoE | TTE1471 | TTE0890 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | NADH:ubiquinone oxidoreductase 24 kD subunit; Best Blastp hit = gi|2126446|pir||A57150 NADP-reducing hydrogenase (EC 1.-.-.-) chain A - Desulfovibrio fructosovorans gi|466363|gb|AAA87054.1| (U07229) potential NAD-reducing hydrogenase subunit [Desulfovibrio fructosovorans], score 157, E-value 1.00E-37. | 0.967 |
| AcpP | NuoF | TTE1471 | TTE0893 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | 0.999 |
| AcpP | PqqL | TTE1471 | TTE1385 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Predicted Zn-dependent peptidase; Best Blastp hit = gi|10175025|dbj|BAB06124.1| (AP001515) processing protease [Bacillus halodurans], score 320, E-value 3.00E-86; Belongs to the peptidase M16 family. | 0.804 |
| AcpP | TTE0126 | TTE1471 | TTE0126 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | echD; Best Blastp hit = gi|3005970|emb|CAA76120.1| (Y16191) echD [Methanosarcina barkeri], score 78.2, E-value 4.00E-14. | 0.993 |
| AtpH | AcpP | TTE0634 | TTE1471 | F0F1-type ATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.604 |
| AtpH | NuoE | TTE0634 | TTE0890 | F0F1-type ATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | NADH:ubiquinone oxidoreductase 24 kD subunit; Best Blastp hit = gi|2126446|pir||A57150 NADP-reducing hydrogenase (EC 1.-.-.-) chain A - Desulfovibrio fructosovorans gi|466363|gb|AAA87054.1| (U07229) potential NAD-reducing hydrogenase subunit [Desulfovibrio fructosovorans], score 157, E-value 1.00E-37. | 0.834 |
| AtpH | NuoF | TTE0634 | TTE0893 | F0F1-type ATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | 0.904 |
| AtpH | PqqL | TTE0634 | TTE1385 | F0F1-type ATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | Predicted Zn-dependent peptidase; Best Blastp hit = gi|10175025|dbj|BAB06124.1| (AP001515) processing protease [Bacillus halodurans], score 320, E-value 3.00E-86; Belongs to the peptidase M16 family. | 0.679 |
| AtpH | TTE0126 | TTE0634 | TTE0126 | F0F1-type ATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | echD; Best Blastp hit = gi|3005970|emb|CAA76120.1| (Y16191) echD [Methanosarcina barkeri], score 78.2, E-value 4.00E-14. | 0.884 |
| Cda1.2 | Dut | TTE1386 | TTE1384 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|7474808|pir||H69882 deacetylase homolog ylxY - Bacillus subtilis gi|2634042|emb|CAB13543.1| (Z99112) alternate gene name: ymxI; similar to deacetylase [Bacillus subtilis], score 190, E-value 1.00E-47. | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.680 |
| Cda1.2 | Pnp | TTE1386 | TTE1387 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|7474808|pir||H69882 deacetylase homolog ylxY - Bacillus subtilis gi|2634042|emb|CAB13543.1| (Z99112) alternate gene name: ymxI; similar to deacetylase [Bacillus subtilis], score 190, E-value 1.00E-47. | Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.610 |
| Cda1.2 | PqqL | TTE1386 | TTE1385 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|7474808|pir||H69882 deacetylase homolog ylxY - Bacillus subtilis gi|2634042|emb|CAB13543.1| (Z99112) alternate gene name: ymxI; similar to deacetylase [Bacillus subtilis], score 190, E-value 1.00E-47. | Predicted Zn-dependent peptidase; Best Blastp hit = gi|10175025|dbj|BAB06124.1| (AP001515) processing protease [Bacillus halodurans], score 320, E-value 3.00E-86; Belongs to the peptidase M16 family. | 0.698 |
| Cda1.2 | TTE1383 | TTE1386 | TTE1383 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|7474808|pir||H69882 deacetylase homolog ylxY - Bacillus subtilis gi|2634042|emb|CAB13543.1| (Z99112) alternate gene name: ymxI; similar to deacetylase [Bacillus subtilis], score 190, E-value 1.00E-47. | Conserved hypothetical protein; Best Blastp hit = gi|10175024|dbj|BAB06123.1| (AP001515) BH2404; unknown conserved protein [Bacillus halodurans], score 62, E-value 2.00E-09. | 0.722 |
| DnaJ | AcpP | TTE0956 | TTE1471 | Molecular chaperones (contain C-terminal Zn finger domain); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-de [...] | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.907 |
| DnaJ | NuoE | TTE0956 | TTE0890 | Molecular chaperones (contain C-terminal Zn finger domain); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-de [...] | NADH:ubiquinone oxidoreductase 24 kD subunit; Best Blastp hit = gi|2126446|pir||A57150 NADP-reducing hydrogenase (EC 1.-.-.-) chain A - Desulfovibrio fructosovorans gi|466363|gb|AAA87054.1| (U07229) potential NAD-reducing hydrogenase subunit [Desulfovibrio fructosovorans], score 157, E-value 1.00E-37. | 0.775 |
| DnaJ | NuoF | TTE0956 | TTE0893 | Molecular chaperones (contain C-terminal Zn finger domain); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-de [...] | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | 0.927 |
| DnaJ | PqqL | TTE0956 | TTE1385 | Molecular chaperones (contain C-terminal Zn finger domain); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-de [...] | Predicted Zn-dependent peptidase; Best Blastp hit = gi|10175025|dbj|BAB06124.1| (AP001515) processing protease [Bacillus halodurans], score 320, E-value 3.00E-86; Belongs to the peptidase M16 family. | 0.733 |
| Dut | Cda1.2 | TTE1384 | TTE1386 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|7474808|pir||H69882 deacetylase homolog ylxY - Bacillus subtilis gi|2634042|emb|CAB13543.1| (Z99112) alternate gene name: ymxI; similar to deacetylase [Bacillus subtilis], score 190, E-value 1.00E-47. | 0.680 |
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