STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE1405Hypothetical protein. (58 aa)    
Predicted Functional Partners:
Frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.773
PyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.773
PolC
DNA polymerase III alpha subunit, the Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.668
WcaA3
Glycosyltransferases involved in cell wall biogenesis; Best Blastp hit = gi|7473780|pir||B75440 rfbJ protein/conserved hypothetical protein - Deinococcus radiodurans (strain R1) gi|6458811|gb|AAF10652.1|AE001958_6 (AE001958) rfbJ protein/conserved hypothetical protein [Deinococcus radiodurans], score 128, E-value 6.00E-29.
       0.668
GcpE
Essential bacterial protein, involved in density-dependent regulation of peptidoglycan biosynthesis; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.668
TTE1401
Predicted membrane-associated Zn-dependent protease 1; Best Blastp hit = gi|7474650|pir||C69881 conserved hypothetical protein yluC - Bacillus subtilis gi|2634028|emb|CAB13529.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis], score 158, E-value 1.00E-37.
       0.668
Dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.668
CdsA
CDP-diglyceride synthetase; Best Blastp hit = gi|10175042|dbj|BAB06141.1| (AP001515) phosphatidate cytidylyltransferase [Bacillus halodurans], score 135, E-value 5.00E-31; Belongs to the CDS family.
       0.668
UppS
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.668
Tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
       0.532
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.