STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LipA2Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (284 aa)    
Predicted Functional Partners:
LipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
 
 0.999
LplA
Lipoate-protein ligase A; Best Blastp hit = gi|7428506|pir||G69830 lipoate-protein ligase homolog yhfJ - Bacillus subtilis gi|2226243|emb|CAA74531.1| (Y14083) hypothetical protein [Bacillus subtilis] gi|2633361|emb|CAB12865.1| (Z99109) similar to lipoate-protein ligase [Bacillus subtilis], score 329, E-value 4.00E-89.
 
 
 0.995
Lpd2
Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes; Best Blastp hit = gi|2147325|pir||I40794 dihydrolipoamide dehydrogenase (EC 1.8.1.4) [validated] - Clostridium magnum gi|472330|gb|AAA21748.1| (L31844) dihydrolipoamide dehydrogenase [Clostridium magnum], score 395, E-value 1.00E-109.
  
 0.887
GcvH
Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 0.684
GcvH2
Glycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 0.684
GuaA
GMP synthase - PP-ATPase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.607
BioB
Biotin synthase and related enzymes; Best Blastp hit = gi|7462819|pir||D72274 hypothetical protein TM1269 - Thermotoga maritima (strain MSB8) gi|4981826|gb|AAD36344.1|AE001782_5 '(AE001782) biotin synthetase, putative [Thermotoga maritima]', score 353, E-value 1.00E-96.
   
  
 0.598
BioB2
Biotin synthase and related enzymes; Best Blastp hit = gi|7462819|pir||D72274 hypothetical protein TM1269 - Thermotoga maritima (strain MSB8) gi|4981826|gb|AAD36344.1|AE001782_5 '(AE001782) biotin synthetase, putative [Thermotoga maritima]', score 343, E-value 2.00E-93.
   
  
 0.598
TTE1671
Hypothetical protein.
       0.579
AceF3
Dihydrolipoamide acyltransferases; Best Blastp hit = gi|13814762|gb|AAK41752.1| '(AE006767) Dihydrolipoamide S-acetyltransferase, carboxy-end (pdhC) [Sulfolobus solfataricus]', score 187, E-value 1.00E-46.
 
  
 0.571
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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