Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GpsA | Lgt | TTE1617 | TTE1744 | Best Blastp hit = gi|7431307|pir||H69636 glycerol-3-phosphate dehydrogenase (NAD+) (EC 1.1.1.8) gpsA - Bacillus subtilis gi|1146220|gb|AAC83967.1| (L47648) NAD+ dependent glycerol-3-phosphate dehydrogenase [Bacillus subtilis] gi|2634701|emb|CAB14199.1| (Z99115) NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus subtilis], score 327, E-value 1.00E-88; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.552 |
| HprK | Lgt | TTE1964 | TTE1744 | Serine kinase of the HPr protein, regulates carbohydrate metabolism; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence [...] | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.584 |
| Lgt | GpsA | TTE1744 | TTE1617 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Best Blastp hit = gi|7431307|pir||H69636 glycerol-3-phosphate dehydrogenase (NAD+) (EC 1.1.1.8) gpsA - Bacillus subtilis gi|1146220|gb|AAC83967.1| (L47648) NAD+ dependent glycerol-3-phosphate dehydrogenase [Bacillus subtilis] gi|2634701|emb|CAB14199.1| (Z99115) NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus subtilis], score 327, E-value 1.00E-88; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.552 |
| Lgt | HprK | TTE1744 | TTE1964 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Serine kinase of the HPr protein, regulates carbohydrate metabolism; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence [...] | 0.584 |
| Lgt | LspA | TTE1744 | TTE1539 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.791 |
| Lgt | NuoF | TTE1744 | TTE0893 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | 0.595 |
| Lgt | TTE0923 | TTE1744 | TTE0923 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | NAD/NADP octopine/nopaline dehydrogenas; Best Blastp hit = gi|3287880|sp|Q44297|ODH_ARTSP OPINE DEHYDROGENASE (N-(1-D-CARBOXYETHYL)-L-NORVALINE DEHYDROGENASE) gi|2127401|pir||I39664 probable D-octopine dehydrogenase (EC 1.5.1.11) - Arthrobacter sp gi|4389299|pdb|1BG6| Crystal Structure Of The N-(1-D-Carboxylethyl)-L-Norvaline Dehydrogenase From Arthrobacter Sp. Strain 1c gi|1060848|dbj|BAA08145.1| (D45211) opine dehydrogenase [Arthrobacter sp.], score 269, E-value 5.00E-71. | 0.575 |
| Lgt | TTE1742 | TTE1744 | TTE1742 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Thioredoxin-like proteins and domains; Best Blastp hit = gi|10176042|dbj|BAB07138.1| (AP001518) nitrogen fixation protein (NifU protein) [Bacillus halodurans], score 77.8, E-value 2.00E-14. | 0.644 |
| Lgt | TTE1743 | TTE1744 | TTE1743 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | GAF domain-containing proteins; Best Blastp hit = gi|7462250|pir||E72365 conserved hypothetical protein - Thermotoga maritima (strain MSB8) gi|4981032|gb|AAD35604.1|AE001728_5 (AE001728) conserved hypothetical protein [Thermotoga maritima], score 109, E-value 2.00E-23. | 0.608 |
| Lgt | TrpA | TTE1744 | TTE1577 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.849 |
| Lgt | TrpB | TTE1744 | TTE1578 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.816 |
| Lgt | YidC | TTE1744 | TTE2799 | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Preprotein translocase subunit YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (By similarity). | 0.708 |
| LspA | Lgt | TTE1539 | TTE1744 | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.791 |
| NuoF | Lgt | TTE0893 | TTE1744 | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.595 |
| NuoF | TTE1742 | TTE0893 | TTE1742 | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | Thioredoxin-like proteins and domains; Best Blastp hit = gi|10176042|dbj|BAB07138.1| (AP001518) nitrogen fixation protein (NifU protein) [Bacillus halodurans], score 77.8, E-value 2.00E-14. | 0.531 |
| NuoF | TrpA | TTE0893 | TTE1577 | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.596 |
| TTE0923 | Lgt | TTE0923 | TTE1744 | NAD/NADP octopine/nopaline dehydrogenas; Best Blastp hit = gi|3287880|sp|Q44297|ODH_ARTSP OPINE DEHYDROGENASE (N-(1-D-CARBOXYETHYL)-L-NORVALINE DEHYDROGENASE) gi|2127401|pir||I39664 probable D-octopine dehydrogenase (EC 1.5.1.11) - Arthrobacter sp gi|4389299|pdb|1BG6| Crystal Structure Of The N-(1-D-Carboxylethyl)-L-Norvaline Dehydrogenase From Arthrobacter Sp. Strain 1c gi|1060848|dbj|BAA08145.1| (D45211) opine dehydrogenase [Arthrobacter sp.], score 269, E-value 5.00E-71. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.575 |
| TTE1742 | Lgt | TTE1742 | TTE1744 | Thioredoxin-like proteins and domains; Best Blastp hit = gi|10176042|dbj|BAB07138.1| (AP001518) nitrogen fixation protein (NifU protein) [Bacillus halodurans], score 77.8, E-value 2.00E-14. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.644 |
| TTE1742 | NuoF | TTE1742 | TTE0893 | Thioredoxin-like proteins and domains; Best Blastp hit = gi|10176042|dbj|BAB07138.1| (AP001518) nitrogen fixation protein (NifU protein) [Bacillus halodurans], score 77.8, E-value 2.00E-14. | NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Best Blastp hit = gi|7431975|pir||D72430 'NADP-reducing hydrogenase, subunit C - Thermotoga maritima (strain MSB8)' gi|4980493|gb|AAD35104.1|AE001689_10 '(AE001689) NADP-reducing hydrogenase, subunit C [Thermotoga maritima]', score 757, E-value 0. | 0.531 |
| TTE1742 | TTE1743 | TTE1742 | TTE1743 | Thioredoxin-like proteins and domains; Best Blastp hit = gi|10176042|dbj|BAB07138.1| (AP001518) nitrogen fixation protein (NifU protein) [Bacillus halodurans], score 77.8, E-value 2.00E-14. | GAF domain-containing proteins; Best Blastp hit = gi|7462250|pir||E72365 conserved hypothetical protein - Thermotoga maritima (strain MSB8) gi|4981032|gb|AAD35604.1|AE001728_5 (AE001728) conserved hypothetical protein [Thermotoga maritima], score 109, E-value 2.00E-23. | 0.773 |
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