STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmyAGlycosidases; Best Blastp hit = gi|231725|sp|P29964|CDAS_THEET 'CYCLOMALTODEXTRINASE (CDASE) (CYCLOMALTODEXTRIN HYDROLASE, DECYCLING)' gi|282487|pir||A42950 cyclomaltodextrinase (EC 3.2.1.54) - Thermoanaerobacter thermohydrosulfuricus gi|144751|gb|AAA23219.1| (M88602) cyclodextrinase [Thermoanaerobacter thermohydrosulfuricus], score 1089, E-value 0; Belongs to the glycosyl hydrolase 13 family. (574 aa)    
Predicted Functional Partners:
Ble
Uncharacterized protein, probably involved in trehalose biosynthesis; Best Blastp hit = gi|11352313|pir||G83376 probable trehalose synthase PA2152 [imported] - Pseudomonas aeruginosa (strain PAO1) gi|9948170|gb|AAG05540.1|AE004642_7 (AE004642) probable trehalose synthase [Pseudomonas aeruginosa], score 129, E-value 9.00E-29.
 
 0.992
AmyA2
Glycosidases; Best Blastp hit = gi|8569360|pdb|1QHO|A 'Chain A, Five-Domain Alpha-Amylase From Bacillus Stearothermophilus, MaltoseACARBOSE COMPLEX' gi|8569361|pdb|1QHP|A 'Chain A, Five-Domain Alpha-Amylase From Bacillus Stearothermophilus, Maltose Complex', score 476, E-value 1.00E-133.
 
  
0.961
GlgP
Glucan phosphorylase; Best Blastp hit = gi|7519173|pir||D71027 hypothetical protein PH1512 - Pyrococcus horikoshii gi|3257937|dbj|BAA30620.1| (AP000006) 837aa long hypothetical protein [Pyrococcus horikoshii], score 405, E-value 1.00E-112.
  
 0.944
TTE0006
Alpha-glucosidases, family 31 of glycosyl hydrolases; Best Blastp hit = gi|4586418|dbj|BAA76396.1| (AB012238) alpha-glucosidase [Bacillus thermoamyloliquefaciens], score 660, E-value 0; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.935
TTE1813
Conserved hypothetical protein; Best Blastp hit = gi|231542|sp|P29761|AMYG_CLOSP 'GLUCOAMYLASE PRECURSOR (GLUCAN 1,4-ALPHA-GLUCOSIDASE) (1,4-ALPHA-D-GLUCAN GLUCOHYDROLASE)' gi|98626|pir||JQ0868 'glucan 1,4-alpha-glucosidase (EC 3.2.1.3) precursor - Clostridium sp' gi|216417|dbj|BAA02251.1| (D12818) glucoamylase precursor [Clostridium sp.], score 1044, E-value 0.
    
 0.926
MalE
Maltose-binding periplasmic proteins/domains; Best Blastp hit = gi|6686562|emb|CAB65651.1| (AJ252161) maltose binding protein [Alicyclobacillus acidocaldarius], score 312, E-value 5.00E-84.
 
  
 0.924
TTE1934
Alpha-glucosidases, family 31 of glycosyl hydrolases; Best Blastp hit = gi|10173318|dbj|BAB04423.1| (AP001509) glucosidase [Bacillus halodurans], score 846, E-value 0; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.914
MalG3
Sugar permeases; Best Blastp hit = gi|6686564|emb|CAB65653.1| (AJ252161) putative maltose transport membrane protein [Alicyclobacillus acidocaldarius], score 295, E-value 4.00E-79.
  
 0.857
PtsG
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; Best Blastp hit = gi|10173035|dbj|BAB04141.1| '(AP001508) PTS system, N-acetylglucosamine-specific enzyme II, ABC component [Bacillus halodurans]', score 418, E-value 1.00E-116.
  
  
 0.805
MalF3
ABC-type sugar transport systems, permease components; Best Blastp hit = gi|6686563|emb|CAB65652.1| (AJ252161) putative maltose transport membrane protein [Alicyclobacillus acidocaldarius], score 316, E-value 3.00E-85.
 
  
 0.779
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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