STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE1827Conserved hypothetical protein; Best Blastp hit = gi|7517561|pir||D70325 hypothetical protein aq_276 - Aquifex aeolicus gi|2982985|gb|AAC06598.1| (AE000682) putative protein [Aquifex aeolicus], score 60.8, E-value 3.00E-08. (355 aa)    
Predicted Functional Partners:
TTE1991
Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); Best Blastp hit = gi|7462035|pir||A72369 (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein - Thermotoga maritima (strain MSB8) gi|4980993|gb|AAD35567.1|AE001726_1 (AE001726) (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein [Thermotoga maritima], score 201, E-value 9.00E-51.
   
 0.984
TTE0319
Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); Best Blastp hit = gi|7462035|pir||A72369 (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein - Thermotoga maritima (strain MSB8) gi|4980993|gb|AAD35567.1|AE001726_1 (AE001726) (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein [Thermotoga maritima], score 182, E-value 7.00E-45.
   
 0.978
TTE1828
Conserved hypothetical protein; Best Blastp hit = gi|7462035|pir||A72369 (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein - Thermotoga maritima (strain MSB8) gi|4980993|gb|AAD35567.1|AE001726_1 (AE001726) (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein [Thermotoga maritima], score 95.5, E-value 9.00E-19.
 
   
0.901
TTE1113
Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); Best Blastp hit = gi|11499541|ref|NP_070783.1| (R)-hydroxyglutaryl-CoA dehydratase activator (hgdC) [Archaeoglobus fulgidus] gi|7450213|pir||F69494 (R)-hydroxyglutaryl-CoA dehydratase activator (hgdC) homolog - Archaeoglobus fulgidus gi|2648583|gb|AAB89296.1| (AE000968) (R)-hydroxyglutaryl-CoA dehydratase activator (hgdC) [Archaeoglobus fulgidus], score 223, E-value 5.00E-57.
   
 0.623
AmyA
Glycosidases; Best Blastp hit = gi|231725|sp|P29964|CDAS_THEET 'CYCLOMALTODEXTRINASE (CDASE) (CYCLOMALTODEXTRIN HYDROLASE, DECYCLING)' gi|282487|pir||A42950 cyclomaltodextrinase (EC 3.2.1.54) - Thermoanaerobacter thermohydrosulfuricus gi|144751|gb|AAA23219.1| (M88602) cyclodextrinase [Thermoanaerobacter thermohydrosulfuricus], score 1089, E-value 0; Belongs to the glycosyl hydrolase 13 family.
       0.601
TTE1826
Conserved hypothetical protein; Best Blastp hit = gi|1842438|gb|AAB47706.1| (U87792) unknown [Bacillus subtilis], score 73.6, E-value 3.00E-12.
       0.601
MalG3
Sugar permeases; Best Blastp hit = gi|6686564|emb|CAB65653.1| (AJ252161) putative maltose transport membrane protein [Alicyclobacillus acidocaldarius], score 295, E-value 4.00E-79.
       0.535
MalF3
ABC-type sugar transport systems, permease components; Best Blastp hit = gi|6686563|emb|CAB65652.1| (AJ252161) putative maltose transport membrane protein [Alicyclobacillus acidocaldarius], score 316, E-value 3.00E-85.
       0.535
MalE
Maltose-binding periplasmic proteins/domains; Best Blastp hit = gi|6686562|emb|CAB65651.1| (AJ252161) maltose binding protein [Alicyclobacillus acidocaldarius], score 312, E-value 5.00E-84.
       0.528
TTE1824
Hypothetical protein.
       0.445
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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