Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTE1908Hypothetical protein. (141 aa)    
Predicted Functional Partners:
Efp
Translation initiation factor eIF-5A; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.844
ProP8
Permeases of the major facilitator superfamily; Best Blastp hit = gi|7430265|pir||G71118 hypothetical protein PH0718 - Pyrococcus horikoshii gi|3257126|dbj|BAA29809.1| (AP000003) 398aa long hypothetical protein [Pyrococcus horikoshii], score 197, E-value 2.00E-49.
       0.773
TTE1909
Conserved hypothetical protein; Best Blastp hit = gi|7518785|pir||D71117 hypothetical protein PH0707 - Pyrococcus horikoshii gi|3257115|dbj|BAA29798.1| (AP000003) 133aa long hypothetical protein [Pyrococcus horikoshii], score 52, E-value 2.00E-06.
       0.773
TTE1910
Hypothetical protein.
       0.773
MutS3
Best Blastp hit = gi|13541505|ref|NP_111193.1| MutS-like ATPase involved in mismatch repair [Thermoplasma volcanium], score 317, E-value 3.00E-85.
       0.494
OppF5
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Best Blastp hit = gi|1168476|sp|P42065|APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPF gi|2119774|pir||I40544 oligopeptide transport ATP-binding protein appF - Bacillus subtilis gi|677944|gb|AAA62357.1| (U20909) AppF [Bacillus subtilis] gi|2633491|emb|CAB12994.1| (Z99110) oligopeptide ABC transporter (ATP-binding protein) [Bacillus subtilis], score 325, E-value 5.00E-88; Belongs to the ABC transporter superfamily.
       0.461
DppD5
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Best Blastp hit = gi|7442601|pir||D72371 'oligopeptide ABC transporter, ATP-binding protein - Thermotoga maritima (strain MSB8)' gi|4981012|gb|AAD35586.1|AE001726_20 '(AE001726) oligopeptide ABC transporter, ATP-binding protein [Thermotoga maritima]', score 317, E-value 1.00E-85.
       0.461
DppC5
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Best Blastp hit = gi|10172962|dbj|BAB04068.1| (AP001508) oligopeptide ABC transporter (permease) [Bacillus halodurans], score 237, E-value 1.00E-61.
       0.461
DppB5
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Best Blastp hit = gi|7449118|pir||G71951 dipeptide transport system permease protein - Helicobacter pylori (strain J99) gi|4154809|gb|AAD05865.1| (AE001465) DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN [Helicobacter pylori J99], score 256, E-value 3.00E-67.
       0.461
GuaA
GMP synthase - PP-ATPase domain protein; Catalyzes the synthesis of GMP from XMP.
  
    0.422
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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