Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTE1925Conserved hypothetical protein; Best Blastp hit = gi|5690009|emb|CAB51936.1| (AJ132472) hypothetical protein [Ruminococcus flavefaciens], score 166, E-value 3.00E-40. (301 aa)    
Predicted Functional Partners:
galT
Best Blastp hit = gi|11386835|sp|Q9KDV2|GAL7_BACHD GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE (GAL-1-P URIDYLYLTRANSFERASE) gi|10173724|dbj|BAB04828.1| (AP001510) galactose-1-phosphate uridyltransferase [Bacillus halodurans], score 520, E-value 1.00E-146.
       0.767
GalK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
       0.766
GalE
UDP-glucose 4-epimerase; Best Blastp hit = gi|11386836|sp|Q9KDV3|GALE_BACHD UDP-GLUCOSE 4-EPIMERASE (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) gi|10173723|dbj|BAB04827.1| (AP001510) UDP-glucose 4-epimerase [Bacillus halodurans], score 418, E-value 1.00E-116; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.746
NagC3
Transcriptional regulator; Best Blastp hit = gi|10173709|dbj|BAB04813.1| (AP001510) transcriptional repressor of the xylose operon [Bacillus halodurans], score 270, E-value 2.00E-71.
       0.737
Chb
N-acetyl-beta-hexosaminidase; Best Blastp hit = gi|1346277|sp|P49008|HEXA_PORGI BETA-HEXOSAMINIDASE PRECURSOR (N-ACETYL-BETA-GLUCOSAMINIDASE) (BETA-GLCNACASE) (BETA-N-ACETYLHEXOSAMINIDASE) (BETA-NAHASE) gi|488526|emb|CAA55582.1| (X78979) beta-N-acetylhexosaminidase [Porphyromonas gingivalis], score 59.7, E-value 1.00E-07.
 
     0.541
TTE2067
Conserved hypothetical protein.
  
     0.539
MinD2
Septum formation inhibitor-activating ATPase; Best Blastp hit = gi|8928198|sp|Q9X2I3|MIND_THEMA SEPTUM SITE-DETERMINING PROTEIN MIND (CELL DIVISION INHIBITOR MIND) gi|7443735|pir||A72200 septum site-determining protein MinD - Thermotoga maritima (strain MSB8) gi|4982456|gb|AAD36932.1|AE001824_1 (AE001824) septum site-determining protein MinD [Thermotoga maritima], score 53.1, E-value 8.00E-06.
  
     0.461
TTE0115
Hypothetical protein.
  
     0.407
TTE1933
Conserved hypothetical protein; Best Blastp hit = gi|7518097|pir||C75001 hypothetical protein PAB1341 - Pyrococcus abyssi (strain Orsay) gi|5458963|emb|CAB50449.1| (AJ248288) hypothetical protein [Pyrococcus abyssi], score 131, E-value 1.00E-29.
 
     0.404
TTE0368
Conserved hypothetical protein; Best Blastp hit = gi|1496004|gb|AAB06263.1| (L39876) ORF1; PepX [Caldicellulosiruptor saccharolyticus], score 148, E-value 1.00E-34.
  
     0.402
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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