STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FtsEPredicted ATPase involved in cell division; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)    
Predicted Functional Partners:
FtsX
Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 0.998
NlpD4
Membrane proteins related to metalloendopeptidases; Best Blastp hit = gi|11350176|pir||E83093 hypothetical protein PA4404 [imported] - Pseudomonas aeruginosa (strain PAO1) gi|6715619|gb|AAF26458.1| (U19797) hypothetical protein [Pseudomonas aeruginosa] gi|9950636|gb|AAG07792.1|AE004856_3 (AE004856) hypothetical protein [Pseudomonas aeruginosa], score 123, E-value 5.00E-27.
 
   
 0.917
TTE1198
ABC-type transport systems, involved in lipoprotein release, permease components; Best Blastp hit = gi|7469821|pir||S76946 hypothetical protein - Synechocystis sp. (strain PCC 6803) gi|1653948|dbj|BAA18858.1| (D90917) hypothetical protein [Synechocystis sp.], score 196, E-value 4.00E-49.
   
 0.915
DppD2
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Best Blastp hit = gi|11355773|pir||E82301 'peptide ABC transporter, ATP-binding protein VC0617 [imported] - Vibrio cholerae (group O1 strain N16961)' gi|9655050|gb|AAF93783.1| '(AE004147) peptide ABC transporter, ATP-binding protein [Vibrio cholerae]', score 260, E-value 2.00E-68; Belongs to the ABC transporter superfamily.
 
    
0.904
TTE0258
ABC-type transport systems, involved in lipoprotein release, permease components; Best Blastp hit = gi|7469821|pir||S76946 hypothetical protein - Synechocystis sp. (strain PCC 6803) gi|1653948|dbj|BAA18858.1| (D90917) hypothetical protein [Synechocystis sp.], score 185, E-value 8.00E-46.
    
 0.903
DppD5
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Best Blastp hit = gi|7442601|pir||D72371 'oligopeptide ABC transporter, ATP-binding protein - Thermotoga maritima (strain MSB8)' gi|4981012|gb|AAD35586.1|AE001726_20 '(AE001726) oligopeptide ABC transporter, ATP-binding protein [Thermotoga maritima]', score 317, E-value 1.00E-85.
 
     
0.900
ArtM
ABC-type amino acid transport system, permease component; Best Blastp hit = gi|13701651|dbj|BAB42944.1| '(AP003135) ORFID:SA1675; hypothetical protein, similar to glutamine-binding periplasmic protein [Staphylococcus aureus]' gi|13876171|dbj|BAB46777.1| (AP003363) amino-acid ABC transporter permease protein homolog [Staphylococcus aureus], score 214, E-value 6.00E-55.
      0.893
DppD3
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Best Blastp hit = gi|7442611|pir||B72282 'oligopeptide ABC transporter, ATP-binding protein - Thermotoga maritima (strain MSB8)' gi|4981773|gb|AAD36295.1|AE001778_16 '(AE001778) oligopeptide ABC transporter, ATP-binding protein [Thermotoga maritima]', score 387, E-value 1.00E-106.
 
     
0.857
SrmR2
Regulator of polyketide synthase expression; Best Blastp hit = gi|7959057|dbj|BAA95938.1| (AB035092) Orf6 [Clostridium perfringens], score 74.3, E-value 2.00E-12.
       0.842
DegQ
Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain; Best Blastp hit = gi|4104598|gb|AAD10260.1| (AF036965) unknown [Lactobacillus sakei], score 100, E-value 4.00E-20.
  
  
 0.795
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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