Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cda1.3 | KdpA | TTE2006 | TTE2012 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | 0.595 |
| Cda1.3 | KdpC | TTE2006 | TTE2010 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | K+-transporting ATPase, c chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | 0.589 |
| Cda1.3 | KdpD | TTE2006 | TTE2009 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | Osmosensitive K+ channel His kinase sensor domain protein; Best Blastp hit = gi|11281914|pir||T46849 K+-transporting ATPase (EC 3.6.1.-) chain D' [imported] - Anabaena sp gi|6635817|gb|AAF19990.1|AF213466_5 (AF213466) potassium-dependent ATPase subunit D' [Anabaena sp. L-31], score 312, E-value 4.00E-84. | 0.608 |
| Cda1.3 | LytE2 | TTE2006 | TTE1337 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | LysM-repeat proteins and domains; Best Blastp hit = gi|728840|sp|P39046|ALYS_ENTHR AUTOLYSIN PRECURSOR (N-ACETYLMURAMOYL-L-ALANINE AMIDASE) (MURAMIDASE-2) gi|97923|pir||A42296 lysozyme 2 (EC 3.2.1.-) precursor - Enterococcus hirae (ATCC 9790) gi|148304|gb|AAA24776.1| '(M77639) beta-1,4-N-acetylmuramoylhydrolase [Enterococcus hirae]', score 101, E-value 8.00E-21. | 0.789 |
| Cda1.3 | LytE3 | TTE2006 | TTE2219 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | LysM-repeat proteins and domains; Best Blastp hit = gi|728840|sp|P39046|ALYS_ENTHR AUTOLYSIN PRECURSOR (N-ACETYLMURAMOYL-L-ALANINE AMIDASE) (MURAMIDASE-2) gi|97923|pir||A42296 lysozyme 2 (EC 3.2.1.-) precursor - Enterococcus hirae (ATCC 9790) gi|148304|gb|AAA24776.1| '(M77639) beta-1,4-N-acetylmuramoylhydrolase [Enterococcus hirae]', score 107, E-value 3.00E-22. | 0.805 |
| Cda1.3 | TTE0862 | TTE2006 | TTE0862 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | Conserved hypothetical protein; Best Blastp hit = gi|7450523|pir||H69783 conserved hypothetical protein ydhD - Bacillus subtilis gi|1945087|dbj|BAA19695.1| (D88802) B. subtilis yaaH hypothetical protein; P37534 (704) [Bacillus subtilis] gi|2632884|emb|CAB12390.1| (Z99107) similar to hypothetical proteins from B. subtilis [Bacillus subtilis], score 139, E-value 6.00E-32. | 0.901 |
| Cda1.3 | TTE1747 | TTE2006 | TTE1747 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | Conserved hypothetical protein; Best Blastp hit = gi|7450524|pir||H70030 conserved hypothetical protein yvbX - Bacillus subtilis gi|2635915|emb|CAB15407.1| (Z99121) similar to hypothetical proteins [Bacillus subtilis], score 129, E-value 8.00E-29. | 0.886 |
| Cda1.3 | TTE2007 | TTE2006 | TTE2007 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | Hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. | 0.598 |
| Cda1.3 | TTE2008 | TTE2006 | TTE2008 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | Hypothetical protein. | 0.598 |
| Cda1.3 | mprF | TTE2006 | TTE2005 | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | Predicted integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.787 |
| KdpA | Cda1.3 | TTE2012 | TTE2006 | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | 0.595 |
| KdpA | KdpC | TTE2012 | TTE2010 | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | K+-transporting ATPase, c chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | 0.999 |
| KdpA | KdpD | TTE2012 | TTE2009 | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | Osmosensitive K+ channel His kinase sensor domain protein; Best Blastp hit = gi|11281914|pir||T46849 K+-transporting ATPase (EC 3.6.1.-) chain D' [imported] - Anabaena sp gi|6635817|gb|AAF19990.1|AF213466_5 (AF213466) potassium-dependent ATPase subunit D' [Anabaena sp. L-31], score 312, E-value 4.00E-84. | 0.973 |
| KdpA | TTE2007 | TTE2012 | TTE2007 | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | Hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. | 0.746 |
| KdpA | TTE2008 | TTE2012 | TTE2008 | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | Hypothetical protein. | 0.746 |
| KdpA | mprF | TTE2012 | TTE2005 | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | Predicted integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.579 |
| KdpC | Cda1.3 | TTE2010 | TTE2006 | K+-transporting ATPase, c chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | Predicted xylanase/chitin deacetylase; Best Blastp hit = gi|10173510|dbj|BAB04614.1| (AP001510) polysaccharide deacetylase (nodulation protein NodB) [Bacillus halodurans], score 247, E-value 1.00E-64. | 0.589 |
| KdpC | KdpA | TTE2010 | TTE2012 | K+-transporting ATPase, c chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | K+-transporting ATPase, A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | 0.999 |
| KdpC | KdpD | TTE2010 | TTE2009 | K+-transporting ATPase, c chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | Osmosensitive K+ channel His kinase sensor domain protein; Best Blastp hit = gi|11281914|pir||T46849 K+-transporting ATPase (EC 3.6.1.-) chain D' [imported] - Anabaena sp gi|6635817|gb|AAF19990.1|AF213466_5 (AF213466) potassium-dependent ATPase subunit D' [Anabaena sp. L-31], score 312, E-value 4.00E-84. | 0.980 |
| KdpC | TTE2007 | TTE2010 | TTE2007 | K+-transporting ATPase, c chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | Hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. | 0.746 |
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