STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE2631Conserved hypothetical protein; Best Blastp hit = gi|7517581|pir||A70334 hypothetical protein aq_380 - Aquifex aeolicus gi|2983053|gb|AAC06661.1| (AE000687) putative protein [Aquifex aeolicus], score 194, E-value 1.00E-48. (325 aa)    
Predicted Functional Partners:
TTE2633
Conserved hypothetical protein; Best Blastp hit = gi|7517582|pir||B70334 hypothetical protein aq_381 - Aquifex aeolicus gi|2983054|gb|AAC06662.1| (AE000687) putative protein [Aquifex aeolicus], score 281, E-value 1.00E-74.
 
 
 
 0.993
TTE2632
Conserved hypothetical protein; Best Blastp hit = gi|7517585|pir||E70334 hypothetical protein aq_384 - Aquifex aeolicus gi|2983057|gb|AAC06665.1| (AE000687) putative protein [Aquifex aeolicus], score 61.2, E-value 5.00E-09.
 
 
 
 0.992
TTE2635
Predicted nucleic acid-binding protein, contains PIN domain; Best Blastp hit = gi|7517583|pir||C70334 hypothetical protein aq_382 - Aquifex aeolicus gi|2983055|gb|AAC06663.1| (AE000687) putative protein [Aquifex aeolicus], score 191, E-value 1.00E-47.
 
 
 
 0.982
TTE2639
Predicted hydrolase of the HD superfamily (permuted catalytic motifs); Best Blastp hit = gi|11499451|ref|NP_070692.1| hypothetical protein [Archaeoglobus fulgidus] gi|7483727|pir||B69483 hypothetical protein AF1867 - Archaeoglobus fulgidus gi|2648683|gb|AAB89390.1| (AE000974) A. fulgidus predicted coding region AF1867 [Archaeoglobus fulgidus], score 223, E-value 7.00E-57.
 
 
 
 0.981
TTE2634
Hypothetical protein.
     
 0.822
TTE2636
Conserved hypothetical protein.
     
 0.790
TTE2771
Helix-turn-helix.
  
     0.678
TTE2713
ABC-type transport systems, involved in lipoprotein release, permease components; Best Blastp hit = gi|10173214|dbj|BAB04319.1| (AP001509) BH0600; unknown [Bacillus halodurans], score 119, E-value 2.00E-25.
  
     0.565
TTE0433
Hypothetical protein.
  
     0.553
TTE2637
Transposase; Best Blastp hit = gi|624698|gb|AAB42162.1| (L38972) transposase [Plasmid pHKK701], score 72.4, E-value 1.00E-11.
       0.511
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.