STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PgsA3Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation); Best Blastp hit = gi|4584121|emb|CAB40617.1| (AJ007788) related sequence M24150 [Bacillus cereus], score 129, E-value 6.00E-29. (367 aa)    
Predicted Functional Partners:
DacC3
D-alanyl-D-alanine carboxypeptidase; Best Blastp hit = gi|10174190|dbj|BAB05292.1| (AP001512) D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein) [Bacillus halodurans], score 235, E-value 6.00E-61; Belongs to the peptidase S11 family.
 
      0.899
CpsG3
Phosphomannomutase; Best Blastp hit = gi|13622593|gb|AAK34301.1| (AE006584) putative phosphomannomutase [Streptococcus pyogenes], score 405, E-value 1.00E-112.
       0.746
HcaD3
Uncharacterized NAD(FAD)-dependent dehydrogenases; Best Blastp hit = gi|10176400|dbj|BAB07495.1| (AP001519) NADH oxidase (nox) [Bacillus halodurans], score 390, E-value 1.00E-107.
       0.598
PncB
Nicotinic acid phosphoribosyltransferase; Best Blastp hit = gi|7520737|pir||H75023 nicotinate phosphoribosyltransferase related ed protein PAB1131 - Pyrococcus abyssi (strain Orsay) gi|5459144|emb|CAB50630.1| (AJ248288) Nicotinate phosphoribosyltransferase related ed protein [Pyrococcus abyssi], score 281, E-value 9.00E-75; Belongs to the NAPRTase family.
  
    0.590
TTE2705
Oligoendopeptidase F; Best Blastp hit = gi|13701181|dbj|BAB42476.1| '(AP003133) ORFID:SA1216; hypothetical protein, similar to oligoendopeptidase [Staphylococcus aureus]' gi|13875697|dbj|BAB45302.1| (AP003362) hypothetical protein [Staphylococcus aureus], score 605, E-value 1.00E-172.
       0.501
TTE2701
Conserved hypothetical protein; Best Blastp hit = gi|1731008|sp|P54478|YQFU_BACSU HYPOTHETICAL 32.5 KD PROTEIN IN CCCA-SODA INTERGENIC REGION gi|7450567|pir||G69954 conserved hypothetical protein yqfU - Bacillus subtilis gi|1303842|dbj|BAA12498.1| (D84432) YqfU [Bacillus subtilis] gi|2634944|emb|CAB14441.1| (Z99116) similar to hypothetical proteins from B. subtilis [Bacillus subtilis], score 227, E-value 2.00E-58.
       0.480
Pol4
DNA polymerase IV (family X); Best Blastp hit = gi|7430181|pir||F70423 DNA polymerase beta family - Aquifex aeolicus gi|2983818|gb|AAC07374.1| (AE000739) DNA polymerase beta family [Aquifex aeolicus], score 441, E-value 1.00E-122.
       0.403
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.