STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0488Weak similarity to unknown protein. Relation: similarity to protein kinases. (409 aa)    
Predicted Functional Partners:
Ta0196
Similarity to known protein: DEATH-ASSOCIATED PROTEIN KINASE 1 (EC 2.7.1.-) (DAP KINASE 1).DEATH-ASSOCIATED PROTEIN KINASE 1 (EC 2.7.1.-) (DAP KINASE 1) - Homo sapiens (Human).Homo sapiens (Human); SWISSPROT:DAPK_HUMAN.
  
 0.963
Ta0037
Similarity to unknown protein: conserved hypothetical protein AF2209 - Archaeoglobus fulgidus; PIR:A69526.
  
 0.904
Ta1192
Hypothetical GTP-binding protein; Weak similarity to known protein.
  
 0.904
Ta1492
Strong similarity to known protein: RNase L inhibitor (clone 8) - human; PIR:S63672.
   
 0.830
Ta0959
NADH dehydrogenase, chain N related protein; Similarity to known protein: Arabidopsis thaliana plastid ndhB gene, exon 1 and joined CDS; TREMBL:ATAJ2490_1.
  
 
 0.759
Ta1087
Probable DnaK-type molecular chaperone; Acts as a chaperone.
   
 0.731
Ta0840
VAT ATPase (VCP-like ATPase); Known protein: VCP-like ATPase - Thermoplasma acidophilum; PIR:T37458; Belongs to the AAA ATPase family. CDC48 subfamily.
   
 0.730
Ta1175
Known protein: cell division control protein 48, AAA family (cdc48-2) homolog - Archaeoglobus fulgidus; PIR:B69512.
   
 0.730
Ta0989
Strong similarity to unknown protein: hypothetical protein APE1169 - Aeropyrum pernix (strain K1); PIR:D72587.
   
 0.713
Ta1398
Weak similarity to known protein. Relation: weak similarity to polymerase - Berne virus, PIR2:S11238.
   
 0.713
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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