STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0029Hypothetical protein. (282 aa)    
Predicted Functional Partners:
Ta0028
Weak similarity to known protein. Relation: weak similarity to TREMBL:SEABCTS_3.
      0.844
Ta0030
Probable acetyl CoA synthase; Strong similarity to known protein: P.furiosus vorA, vorB, vorD, porA, porB, porC, porD and ORFZ genes; TREMBL:PFPORVOR_4Function: Reductive carboxylate cycle (CO2 fixation).
  
    0.625
Ta0031
Similarity to unknown protein: conserved hypothetical protein AF0284 - Archaeoglobus fulgidus; PIR:D69285.
       0.618
Ta0563
Similarity to unknown protein: hypothetical protein MJ0014 - Methanococcus jannaschii; PIR:F64301.
 
  
 0.614
Ta0564
Similarity to unknown protein: hypothetical protein MJ0751 - Methanococcus jannaschii; PIR:G64393.
  
     0.518
Ta0381
Conserved hypothetical protein; Similarity to unknown protein: probable transposase - Streptomyces coelicolor; PIR:T36649.
  
     0.477
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.