STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0089Similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene, completecds; and unknown genes; TREMBL:AF007381_3. (159 aa)    
Predicted Functional Partners:
Ta0088
Similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene, completecds; and unknown genes; TREMBL:AF007381_3.
     0.980
Ta0087
Similarity to unknown protein: hypothetical protein PH1365 - Pyrococcus horikoshii; PIR:G71008.
  
 
 0.921
Ta0734
Conserved hypothetical membrane protein; Weak similarity to known protein.
  
 
 0.652
Ta0856
Hypothetical membrane protein.
  
 
 0.652
Ta0225
Similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene, completecds; and unknown genes; TREMBL:AF007381_3.
  
     0.613
Ta1072
ABC transporter ATP-binding protein related protein; Similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene, completecds; and unknown genes; TREMBL:AF007381_3.
  
     0.592
Ta0086
Similarity to unknown protein: hypothetical protein homolog MJ0888 - Methanococcus jannaschii; PIR:H64410.
  
   0.566
Ta0233
Similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene, completecds; and unknown genes; TREMBL:AF007381_3.
  
     0.553
Ta0869
Similarity to known protein: Streptomyces rochei silent ABC transporter genes; TREMBL:SRY15759_2.
  
     0.547
Ta1027
Similarity to known protein: FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC - Actinobacillus pleuropneumoniae (Haemophilus pleuropneumoniae); SWISSPROT:AFUC_ACTPL.
  
     0.492
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.