STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0146Similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes, complete cds; TREMBL:AF012836_3. (247 aa)    
Predicted Functional Partners:
Ta0145
Similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes, complete cds; TREMBL:AF012836_2.
 
 0.995
Ta0144
Weak similarity to known protein. Relation: weak similarity to GLYCEROL-3-PHOSPHATE-BINDING PERIPLASMIC PROTEIN PRECURSOR, Escherichia coli, SWISSPROT:UGPB_ECOLI.
 
 0.993
Ta0690
Probable sugar ABC transporter, permease protein; Similarity to known protein: membrane protein lacF - Agrobacterium radiobacter; PIR1:MMAGCF. Relation: similarity to membrane protein lacG - Agrobacterium radiobacter;PIR1:MMAGCF.
 
 0.962
Ta0127
Inner membrane protein of trehalose/maltose (malF) related protein; Similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes, complete cds; TREMBL:AF012836_2.
 
 0.959
Ta0143
Probable ATP-binding protein; Strong similarity to known protein: Actinobacillus actinomycetemcomitans putative polyamine transport operon, complete sequence; TREMBL:AF077856_1.
 
  
 0.959
Ta0130
Strong similarity to known protein: MalK; Thermococcus litoralis trehalose/maltose transport ATP-hydrolyzing subunitMalK (malK) gene, complete cds; TREMBL:AF126010_1.
 
   
 0.646
Ta0147
Similarity to unknown protein: hypothetical protein PH1222 - Pyrococcus horikoshii; PIR:H71065.
       0.645
Ta0688
Probable sugar ABC transporter, ATP-binding protein; Strong similarity to known protein: protein1; Rhodobacter sphaeroides operon regulator (smoC), periplasmicsorbitol-binding protein (smoE), sorbitol/mannitol transport inner membraneprotein (smoF), sorbitol/mannitol transport inner membrane protein (smoG), sorbitol/mannitol transport ATP-binding transport protein (smoK), sorbitoldehydrogenase (smoS), mannitol dehydrogenase (mtlK), and periplasmicmannitol-binding protein (smoM) genes, complete cds; TREMBL:AF018073_5. Relation: stron similarity to sorbitol/mannitol transport atp-binding [...]
 
   
 0.585
Ta0138
Similarity to known protein: neopullulanase (EC 3.2.1.135) - Bacillus sp; PIR:JS0673.
 
  
 0.560
Ta0126
Similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes, complete cds; TREMBL:AF012836_1.
 
   
 0.447
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.