STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0155Similarity to unknown protein: hypothetical protein AF0782 - Archaeoglobus fulgidus; PIR:F69347. (122 aa)    
Predicted Functional Partners:
Ta0154
Similarity to unknown protein: conserved hypothetical protein yqgE - Bacillus subtilis; PIR:H69955.
       0.534
Ta0101
Similarity to known protein: ZINC-FINGER PROTEIN ZPR1 - Schizosaccharomyces pombe (Fission yeast); SWISSPROT:ZPR1_SCHPO.
       0.426
Ta1292
Conserved hypothetical protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome.
       0.426
Ta1293
RNase PH (yeast SIK6) related protein; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails.
       0.426
Ta1294
rRNA processing protein (yeast RRP45) related protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site.
       0.426
Ta1423
Similarity to unknown protein: hypothetical protein PAB1506 - Pyrococcus abyssi (strain Orsay); PIR:B75041.
       0.426
Ta0072
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.412
Ta0508
Probable cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.412
Ta0607
Weak similarity to known protein. Relation: similarity to SWISSPROT:FTSZ_BRELA is weak.
  
 
 0.412
Ta1291
Strong similarity to unknown protein: conserved hypothetical protein MTH685 - Methanobacterium thermoautotrophicum (strain Delta H); PIR:C69191.
       0.412
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.