STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0239Probable urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (609 aa)    
Predicted Functional Partners:
Ta0238
Similarity to known protein: ATRAZINE CHLOROHYDROLASE (EC 3.8.1.-) - Pseudomonas sp. (strain ADP); SWISSPROT:ATZA_PSESD; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 0.999
Ta0242
Strong similarity to known protein: HISTIDINE AMMONIA-LYASE (EC 4.3.1.3) (HISTIDASE).HISTIDINE AMMONIA-LYASE (EC 4.3.1.3) (HISTIDASE) - Pseudomonas putida.Pseudomonas putida; SWISSPROT:HUTH_PSEPU; Belongs to the PAL/histidase family.
 
 0.999
Ta1058
Similarity to known protein: agmatinase (EC 3.5.3.11) [validated] - Escherichia coli; PIR:C42604Function: Arginine and proline metabolism; Belongs to the arginase family.
  
  
 0.786
Ta1060
Similarity to known protein: ATRAZINE CHLOROHYDROLASE (EC 3.8.1.-) - Pseudomonas sp. (strain ADP); SWISSPROT:ATZA_PSESDFunction: FIRST STEP IN ATRAZINE DEGRADATION PATHWAY.
  
  
 0.613
Ta0240
Weak similarity to known protein. Relation: weak similarity to FLAGELLAR BIOSYNTHETIC PROTEIN FLIP, Agrobacterium tumefaciens, SWISSPROT:FLIP_AGRTU (involved in flagellar basal-body structure).
     
 0.598
Ta0241
Weak similarity to unknown protein.
       0.572
Ta1226
Similarity to unknown protein: hypothetical protein APE2147 - Aeropyrum pernix (strain K1); PIR:F72521.
   
    0.487
Ta0934
Similarity to known protein: acetylornithine deacetylase (EC 3.5.1.16) - Escherichia coli; PIR:B42377Function: Urea cycle and metabolism of amino groups.
     
 0.431
Ta1376
Weak similarity to known protein.
       0.426
Ta1474
Conserved hypothetical protein.
       0.426
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.