STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0329Strong similarity to known protein: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRONTRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) - Clostridium acetobutylicum; SWISSPROT:ETFA_CLOAB. (351 aa)    
Predicted Functional Partners:
Ta0328
FIXA (related to carnitine metabolism) related protein; Similarity to known protein: FIXA PROTEIN.FIXA PROTEIN - Escherichia coli.Escherichia coli; SWISSPROT:FIXA_ECOLI.
 0.999
Ta0211
FIXA (related to carnitine metabolism) related protein; Similarity to known protein: FIXA PROTEIN.FIXA PROTEIN - Escherichia coli.Escherichia coli; SWISSPROT:FIXA_ECOLI.
 0.982
Ta0327
Conserved hypothetical protein; Strong similarity to unknown protein: ferredoxin - Thermotoga maritima (strain MSB8); PIR:A72242.
 
 0.981
Ta0974
Probable acyl-CoA dehydrogenase; Strong similarity to known protein: T.thermosaccharolyticum BCS operon DNA; TREMBL:TTBCSOPRN_2. Relation: similar as well to butyryl-CoA dehydrogenase - Thermoanaerobacterium thermosaccharolyticum, TREMBL:TTBCSOPRN_2.
 
 0.880
Ta0326
Similarity to known protein: FIXC PROTEIN - Bradyrhizobium japonicum; SWISSPROT:FIXC_BRAJA.
 
 
 0.866
Ta0295
Similarity to known protein: ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC (EC 1.3.99.2)(SCAD) (BUTYRYL-COA DEHYDROGENASE) - Clostridium acetobutylicum; SWISSPROT:ACDS_CLOAB.
 
 0.849
Ta0230
Probable isovaleryl-CoA dehydrogenase; Strong similarity to known protein: A.thaliana mRNA for isovaleryl-CoA dehydrogenase; TREMBL:ATISOVAL_1.
 
 
 0.829
Ta0646
Similarity to known protein: ACYL-COA DEHYDROGENASE (EC 1.3.99.-) - Bacillus subtilis; SWISSPROT:ACDB_BACSU.
 
 0.818
Ta0294
Similarity to known protein: ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC (EC 1.3.99.2)(SCAD) (BUTYRYL-COA DEHYDROGENASE) - Clostridium acetobutylicum; SWISSPROT:ACDS_CLOAB.
 
 
 0.815
Ta0398
Similarity to known protein: ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC (EC 1.3.99.2)(SCAD) (BUTYRYL-COA DEHYDROGENASE) - Clostridium acetobutylicum; SWISSPROT:ACDS_CLOABFunction: Fatty acid metabolism, Valine, leucine and isoleucine degradation, beta-Alanine metabolism, Propanoate metabolism.
 
 
 0.802
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.