STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0534Peptide chain release factor subunit 1 related protein; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. (417 aa)    
Predicted Functional Partners:
Ta1492
Strong similarity to known protein: RNase L inhibitor (clone 8) - human; PIR:S63672.
  
 
 0.999
Ta0444
Probable translation elongation factor aEF-1, alpha chain; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
  
 0.953
Ta0114
N-methyl-transferase related protein; Similarity to known protein: S.alboniger napH, pur7, pur10, pur6, pur4, pur5 and pur3 genes; TREMBL:SAPURCLUS_7.
   
 0.929
Ta1286
Known protein: ribosomal protein L15.eR - Thermoplasma acidophilum; PIR:JC4150; Belongs to the eukaryotic ribosomal protein eL15 family.
 
 0.913
Ta1259
Known protein: ribosomal protein s4e - Thermoplasma acidophilum; PIR:T37467; Belongs to the eukaryotic ribosomal protein eS4 family.
  
  0.872
Ta0281
Similarity to known protein: arginine--tRNA ligase (EC 6.1.1.19) - Corynebacterium glutamicum; PIR1:A49936; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.863
Ta0605
Translation initiation factor eIF-2, beta chain related protein; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family.
  
  
 0.860
Ta1262
Probable ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
  0.854
Ta1131
Strong similarity to known protein: 40s ribosomal protein s13 - fission yeast (Schizosaccharomyces pombe); PIR:S26296.
 
 0.838
Ta0359
Acidic ribosomal protein P0 related protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
 0.831
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.