STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0604Conserved hypothetical membrane protein; Similarity to unknown protein: O-antigen transporter related protein - Methanobacterium thermoautotrophicum (strain Delta H); PIR:A69149. Relation: weak similarity to O-antigen transporter related protein - Methanobacterium thermoautotrophicum (strain Delta H), PIR:A69149. (509 aa)    
Predicted Functional Partners:
Ta0603
Similarity to known protein: aldehyde dehydrogenase (EC 1.2.-.-) - Bacillus stearothermophilus; PIR:I39769.
       0.634
Ta0340
Conserved hypothetical protein; Similarity to unknown protein: probable hexosyltransferase (EC 2.4.1.-) MJ1607 - Methanococcus jannaschii; PIR:F64500. Relation: weak similarity to Mannosyltransferase (EC 5.-.-.-) B - Escherichia coli, PIR2:I76776.
  
  
 0.505
Ta0702
Conserved hypothetical protein; Weak similarity to known protein.
  
  
 0.505
Ta0707
Conserved hypothetical protein; Weak similarity to unknown protein.
  
  
 0.505
Ta0712
Weak similarity to known protein. Relation: weak similarity to 40 kda membrane-bound galactosyl- transferase - Shigella dysenteriae; S73325_2.
  
  
 0.505
Ta1067
Similarity to known protein: N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN(GLCNAC-PI SYNTHESIS PROTEIN) - Saccharomyces cerevisiae (Baker's yeast); SWISSPROT:GPI3_YEAST.
  
  
 0.505
Ta0695
Conserved hypothetical protein; Weak similarity to known protein. Relation: weak similarity to putative glcnac transferase - Escherichia coli; TREMBL:AF013583_4.
  
  
 0.502
Ta0696
Conserved hypothetical protein; Weak similarity to known protein.
  
  
 0.502
Ta0701
Conserved hypothetical protein; Weak similarity to known protein.
  
  
 0.502
Ta0714
Weak similarity to unknown protein.
  
  
 0.502
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.