STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0652Hypothetical protein. (210 aa)    
Predicted Functional Partners:
Ta0653
S-adenosyl-L-methionine uroporphyrinogen methyltransferase related protein; Similarity to known protein: uroporphyrin-III C-methyltransferase (EC 2.1.1.107) [validated] - Methanobacterium ivanovii; PIR:A42471.
  
 
 0.995
Ta0658
Similarity to known protein: precorrin-2 methyltransferase (EC 2.1.1.-) - Pseudomonas sp; PIR:D36145.
    
 0.975
Ta1396
Hypothetical protein.
  
  
 0.844
Ta0660
Weak similarity to known protein. Relation: weak simmilarity to uroporphyrin-III C-methyltransferase (EC 2.1.1.107) - maize, PIR:T03269.
     
 0.798
Ta0657
precorrin-8W decarboxylase related protein; Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin-7.
 
   
 0.778
Ta0656
Cobalamin biosynthesis protein D related protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
     
 0.760
Ta0655
Probable cobalamin biosynthesis precorrin-3 methylase; Similarity to known protein: Bacillus megaterium 16kb genomic sequence, cobalamin operon; TREMBL:BMAJ758_2.
     
 0.739
Ta0654
Similarity to known protein: PRECORRIN-8X METHYLMUTASE (EC 5.4.1.2) (PRECORRIN ISOMERASE) - Salmonella typhimurium; SWISSPROT:CBIC_SALTYORF_prediction: This ORF might be 33 aa longer, however, codon usage and frequency of rare codons support the current gene prediction.
     
 0.738
Ta0659
Probable precorrin-4 methylase; Strong similarity to known protein: Bacillus megaterium 16kb genomic sequence, cobalamin operon; TREMBL:BMAJ758_9; Belongs to the precorrin methyltransferase family.
     
 0.734
Ta0572
Porphobilinogen deaminase related protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
 
  
 0.733
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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