STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta0876Similarity to unknown protein: conserved hypothetical protein yxiE N17E [imported] - Bacillus subtilis; PIR:A70077. (142 aa)    
Predicted Functional Partners:
Ta0875
Conserved hypothetical membrane protein.
 
     0.644
Ta0812
Similarity to unknown protein: hypothetical protein MJ1404 - Methanococcus jannaschii; PIR:C64475.
  
    0.628
Ta0460
Endonuclease V related protein; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA (By similarity); In the N-terminal section; belongs to the MGMT family.
  
    0.578
Ta0207
Similarity to unknown protein: hypothetical protein PAB2118 - Pyrococcus abyssi (strain Orsay); PIR:C75148. Relation: weak similarity to coenzyme F420--quinone oxidoreductase (EC 1.6.5.-) 41K chain - Archaeoglobus fulgidus, PIR:C69276.
  
    0.520
Ta0877
Similarity to known protein: amino acid transporter homolog yhdG - Bacillus subtilis; PIR:E69825.
  
  
 0.461
Ta0878
Ribose-5-phosphate isomerase related protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.452
Ta0864
Similarity to known protein: Thermotoga maritima heat shock protein 70 (hsp70) and small heat shockprotein (shsp) genes, complete cds; TREMBL:AF106330_2.
 
 
 0.412
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.