STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta1199Similarity to known protein: Clostridium hydroxybenzoicum 4-hydroxybenzoate decarboxylase (ohb1) gene, complete cds; TREMBLNEW:AF128880_1Function: Phenylalanine metabolism. (480 aa)    
Predicted Functional Partners:
Ta1100
Probable phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
 0.991
Ta1198
Similarity to known protein: 4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) - Escherichia coli; PIR:JC2316Function: ubiquinone biosynthesis.
 
  
 0.989
Ta0801
Ubiquinone/menaquinone methyltransferase related protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
      0.678
Ta1204
Similarity to known protein: Chlamydomonas sp. mRNA for ribosomal protein S27, NaCl inducible, completecds, clone:NaEX96-53.gene: RS27; product: ribosomal protein S27; Chlamydomonas sp. HS-5 mRNA for ribosomal protein S27, NaCl inducible, complete cds, clone:NaEX96-53; TREMBL:AU066514_1ORF_prediction: This ORF may be 22 aa longer starting with MSQSNYST... Whereas the frequency of rare codons would support this earlier start or the reading frame, codon usage is rather moderate in this hypothetical ORF region. Since the related forms of related archaebacterial proteins are shorter as wel [...]
       0.579
Ta1205
50S ribosomal protein L44 related protein; Binds to the 23S rRNA.
       0.579
Ta1203
Translation initiation factor eIF-2, alpha subunit related protein; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family.
       0.572
Ta1201
Conserved hypothetical protein; Strong similarity to unknown protein: probable 3-isopropylmalate dehydratase - Archaeoglobus fulgidus; PIR:E69315.
       0.569
Ta1202
Conserved hypothetical protein; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA.
       0.569
Ta1200
Probable cobyrinic acid a, c-diamide synthase (cbiA); Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
       0.558
Ta0047
Similarity to known protein: anaerobic sulfite reduction protein B - Salmonella typhimurium; PIR:B38453Function: potentially a sulfite reduction protein. ORF_prediction: A related proteins is more than 25 aa longer, this ORF possibly only 7 aa longer due to genomic organization, sticked to prediction.
  
    0.547
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.