Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ta0612 | Ta0623 | gene:9571831 | gene:9571842 | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | 0.941 |
| Ta0612 | Ta0980 | gene:9571831 | gene:9572198 | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | 0.544 |
| Ta0612 | Ta1096 | gene:9571831 | gene:9572316 | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | Probable glycerol kinase; Strong similarity to known protein: GLYCEROL KINASE (EC 2.7.1.30) (ATP:GLYCEROL 3-PHOSPHOTRANSFERASE)(GLYCEROKINASE) (GK) - Thermus aquaticus (subsp. flavus); SWISSPROT:GLPK_THEFL. | 0.941 |
| Ta0612 | Ta1259 | gene:9571831 | gene:9572482 | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | Known protein: ribosomal protein s4e - Thermoplasma acidophilum; PIR:T37467; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.443 |
| Ta0612 | Ta1270 | gene:9571831 | gene:9572493 | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | Probable 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.502 |
| Ta0612 | Ta1276 | gene:9571831 | gene:9572500 | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | Thermosome beta chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | 0.546 |
| Ta0612 | Ta1288 | gene:9571831 | gene:9572512 | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities; Belongs to the peptidase T1A family. | 0.999 |
| Ta0623 | Ta0612 | gene:9571842 | gene:9571831 | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | 0.941 |
| Ta0623 | Ta0980 | gene:9571842 | gene:9572198 | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | 0.421 |
| Ta0623 | Ta1096 | gene:9571842 | gene:9572316 | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | Probable glycerol kinase; Strong similarity to known protein: GLYCEROL KINASE (EC 2.7.1.30) (ATP:GLYCEROL 3-PHOSPHOTRANSFERASE)(GLYCEROKINASE) (GK) - Thermus aquaticus (subsp. flavus); SWISSPROT:GLPK_THEFL. | 0.999 |
| Ta0623 | Ta1259 | gene:9571842 | gene:9572482 | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | Known protein: ribosomal protein s4e - Thermoplasma acidophilum; PIR:T37467; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.903 |
| Ta0623 | Ta1276 | gene:9571842 | gene:9572500 | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | Thermosome beta chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | 0.421 |
| Ta0623 | Ta1288 | gene:9571842 | gene:9572512 | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities; Belongs to the peptidase T1A family. | 0.941 |
| Ta0980 | Ta0612 | gene:9572198 | gene:9571831 | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | Proteasome, beta chain; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities. | 0.544 |
| Ta0980 | Ta0623 | gene:9572198 | gene:9571842 | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | Strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii; PIR:D71156. | 0.421 |
| Ta0980 | Ta1259 | gene:9572198 | gene:9572482 | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | Known protein: ribosomal protein s4e - Thermoplasma acidophilum; PIR:T37467; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.644 |
| Ta0980 | Ta1270 | gene:9572198 | gene:9572493 | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | Probable 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.734 |
| Ta0980 | Ta1276 | gene:9572198 | gene:9572500 | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | Thermosome beta chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | 0.982 |
| Ta0980 | Ta1286 | gene:9572198 | gene:9572509 | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | Known protein: ribosomal protein L15.eR - Thermoplasma acidophilum; PIR:JC4150; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.569 |
| Ta0980 | Ta1288 | gene:9572198 | gene:9572512 | Thermosome, alpha chain; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The T.acidophilum proteasome is able to cleave oligopeptides after Tyr, Leu, Phe, and to a lesser extent after Glu and Arg. Thus, displays chymotrypsin-like activity and low level of caspase-like and trypsin- like activities; Belongs to the peptidase T1A family. | 0.752 |
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