STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta1392Conserved hypothetical protein; Similarity to unknown protein: altronate dehydratase (EC 4.2.1.7) - Escherichia coli; PIR:H65097. (95 aa)    
Predicted Functional Partners:
Ta1393
Conserved hypothetical protein; Similarity to unknown protein: probable altronate hydrolase C-terminus Cj0483 [imported] - Campylobacter jejuni (strain NCTC 11168); PIR:F81393.
 
  
  0.994
Ta0952
Probable malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
    
  0.901
Ta1394
Similarity to known protein: NTA OPERON TRANSCRIPTIONAL REGULATOR - Chelatobacter heintzii; SWISSPROT:NTRA_CHEHE.
     
 0.684
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.