STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta1473Weak similarity to unknown protein. (353 aa)    
Predicted Functional Partners:
Ta1474
Conserved hypothetical protein.
       0.555
Ta0875
Conserved hypothetical membrane protein.
 
     0.502
Ta1472
Conserved hypothetical protein; Similarity to unknown protein. Relation: similarity to various putative transposases.
       0.494
Ta1471
Conserved hypothetical protein; Similarity to unknown protein: probable transposase - Streptomyces coelicolor; PIR:T36649. Relation: similarity to various putative transposases.
       0.485
Ta1177
Hypothetical membrane protein; Weak similarity to known proteinORF_prediction: Presence of protein splicing possible, but not predictable., possible location of the Intein aa 186-400.
  
     0.467
Ta1470
Similarity to unknown protein: hypothetical protein - Bacillus megaterium (fragment); PIR:T30575.
  
 
 0.462
Ta0140
Conserved hypothetical protein; Weak similarity to known protein. Relation: weak similarity to CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, Chlorobium limicola, SWISSPROT:UCRI_CHLLT; Belongs to the SDX family.
 
     0.460
Ta1136
Similarity to unknown protein: transmembrane oligosaccharyl transferase homolog - Archaeoglobus fulgidus; PIR:D69297.
 
 
 0.459
Ta1279
Conserved hypothetical membrane protein.
 
   0.444
Ta1229
Strong similarity to known protein: Rieske iron-sulfur protein soxL precursor - Sulfolobus acidocaldarius; PIR:S71348.
  
   
 0.432
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.