STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ta1496Hypothetical protein; No similarityFunction: transcription regulator. (155 aa)    
Predicted Functional Partners:
Ta0869
Similarity to known protein: Streptomyces rochei silent ABC transporter genes; TREMBL:SRY15759_2.
 
    0.923
Ta0226
Conserved hypothetical protein; Similarity to unknown protein: daunorubicin resistance membrane protein (drrb) PAB1924 - Pyrococcus abyssi (strain Orsay); PIR:D75108.
 
     0.493
Ta0790
Similarity to known protein: endonuclease III - Thermotoga maritima (strain MSB8); PIR:F72387.
       0.426
Ta0641
Similarity to known protein: daunorubicin resistance protein - Streptomyces peucetius; PIR:S27707.
 
    0.423
Ta1494
Similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8); PIR:F72219.
  
    0.404
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.