STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVG0012647N-terminal acetyltransferase complex subunit [ARD1]. (154 aa)    
Predicted Functional Partners:
TVG0334241
Ribosomal protein large subunit L25; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
   
   0.605
TVG0012073
DNA repair helicase.
  
    0.571
TVG0341099
Ribosomal protein large subunit L32; Belongs to the eukaryotic ribosomal protein eL32 family.
  
 
   0.546
TVG1582460
RNase L inhibitor.
   
    0.514
TVG0336649
Ribosomal protein large subunit L35; Belongs to the universal ribosomal protein uL29 family.
  
 
 
 0.488
TVG0342046
Ribosomal protein large subunit L5; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
   
   0.487
TVG0335848
Ribosomal protein large subunit L17; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
  
   0.469
TVG0333226
Ribosomal protein large subunit L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
   
   0.462
TVG0008932
Ribosomal protein large subunit L31; Belongs to the eukaryotic ribosomal protein eL31 family.
 
   0.459
TVG0402431
Ribosomal protein large subunit L42; Binds to the 23S rRNA.
  
   0.447
Your Current Organism:
Thermoplasma volcanium
NCBI taxonomy Id: 273116
Other names: T. volcanium GSS1, Thermoplasma volcanium GSS1, Thermoplasma volcanium str. GSS1, Thermoplasma volcanium strain GSS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.