STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVG0220714Hypothetical protein. (352 aa)    
Predicted Functional Partners:
TVG0221806
Hypothetical protein.
 
     0.722
TVG0566451
Fkbp-type peptidyl-prolyl cis-trans isomerase.
  
     0.504
TVG0222861
Hypothetical protein.
       0.495
TVG0327166
TVG0327166 protein.
  
     0.480
TVG0855624
Hypothetical protein.
  
     0.475
TVG0411662
Mevalonate 3,5-bisphosphate decarboxylase; Catalyzes the ATP-independent decarboxylation of (R)- mevalonate 3,5-bisphosphate to isopentenyl phosphate. Functions in an alternative mevalonate pathway, only present in extreme acidophiles of the Thermoplasmatales order, which passes through mevalonate 3- phosphate rather than mevalonate 5-phosphate.
  
     0.463
TVG0466379
Hypothetical protein.
  
     0.461
TVG0579516
Hypothetical protein.
  
     0.461
TVG1525115
Hypothetical protein.
  
     0.460
TVG0154235
Hypothetical protein.
 
     0.455
Your Current Organism:
Thermoplasma volcanium
NCBI taxonomy Id: 273116
Other names: T. volcanium GSS1, Thermoplasma volcanium GSS1, Thermoplasma volcanium str. GSS1, Thermoplasma volcanium strain GSS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.